RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GPR27Q9NS67 375 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 FBXL7Q9UJT9 491 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 KDM2BQ8NHM5 1336 aa5.17□□□□□ -1.58
SPG11-206ENST00000558093 H7BY64 318 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 DIAPH1O60610 1272 aaKnown RBP5.16□□□□□ -1.58
SPG11-206ENST00000558093 DGKIO75912 1065 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 ZSCAN22P10073 491 aaPredicted RBP5.16□□□□□ -1.58
SPG11-206ENST00000558093 NCAM1P13591 858 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 PMLP29590 882 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 LIMS1P48059 325 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 TESK1Q15569 626 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 CHRNA2Q15822 529 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 TCERG1LQ5VWI1 586 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 RIOX2Q8IUF8 465 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 TMEM151BQ8IW70 566 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 OSBP2Q969R2 916 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 DDX11Q96FC9 970 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 OSBPL2Q9H1P3 480 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 PLA2G2DQ9UNK4 145 aa5.16□□□□□ -1.58
SPG11-206ENST00000558093 TRBV23-1A0A0A0MS06 115 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 BLACEA4D250 179 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 FAM221BA6H8Z2 402 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 ARNTLO00327 626 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 IRS4O14654 1257 aaPredicted RBP5.15□□□□□ -1.59
SPG11-206ENST00000558093 CAPNS1P04632 268 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 ASGR2P07307 311 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 MC3RP41968 323 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 SLC6A11P48066 632 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 AFF3P51826 1226 aaKnown RBP5.15□□□□□ -1.59
SPG11-206ENST00000558093 SUMO1P63165 101 aaKnown RBP5.15□□□□□ -1.59
SPG11-206ENST00000558093 RSPO2Q6UXX9 243 aaPredicted RBP5.15□□□□□ -1.59
SPG11-206ENST00000558093 LRP10Q7Z4F1 713 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 MILR1Q7Z6M3 343 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 AMIGO3Q86WK7 504 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 Q8N1Y9 231 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 NLGN1Q8N2Q7 840 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 DRC1Q96MC2 740 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 EPB41L1Q9H4G0 881 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 PALD1Q9ULE6 856 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 NPFFR2Q9Y5X5 522 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 X6R8D5 127 aa5.15□□□□□ -1.59
SPG11-206ENST00000558093 KRIT1O00522 736 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 ADCY3O60266 1144 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 MAFKO60675 156 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 APPP05067 770 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 FBLN1P23142 703 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 GRK2P25098 689 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 GRK3P35626 688 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 BMS1Q14692 1282 aaKnown RBP5.14□□□□□ -1.59
SPG11-206ENST00000558093 NFE2L2Q16236 605 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 KIZQ2M2Z5 673 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 KCNT2Q6UVM3 1135 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 ETV3LQ6ZN32 361 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 FAM129CQ86XR2 697 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 C1QL4Q86Z23 238 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 CILP2Q8IUL8 1156 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 SCUBE1Q8IWY4 988 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 IFNL3Q8IZI9 196 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
SPG11-206ENST00000558093 PANK1Q8TE04 598 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 UBXN4Q92575 508 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 MKL1Q969V6 931 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 PWWP2AQ96N64 755 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 ZFYVE21Q9BQ24 234 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 ALG1Q9BT22 464 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 PMF1-BGLAPU3KQ54 211 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 IRS2Q9Y4H2 1338 aa5.14□□□□□ -1.59
SPG11-206ENST00000558093 BTBD11A6QL63 1104 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 HGSO14964 777 aaPredicted RBP5.13□□□□□ -1.59
SPG11-206ENST00000558093 SGSM2O43147 1006 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 MSCO60682 206 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 CYP2C8P10632 490 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 GPR85P60893 370 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 FOXO4P98177 505 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 NTRK3Q16288 839 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 FAM209AQ5JX71 171 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 STEAP3Q658P3 488 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 STYK1Q6J9G0 422 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 MTDHQ86UE4 582 aaKnown RBP5.13□□□□□ -1.59
SPG11-206ENST00000558093 ZC3H18Q86VM9 953 aaKnown RBP5.13□□□□□ -1.59
SPG11-206ENST00000558093 KRTAP1-3Q8IUG1 177 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 TMEFF1Q8IYR6 380 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 SMARCC2Q8TAQ2 1214 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.13□□□□□ -1.59
SPG11-206ENST00000558093 MRFAP1L1Q96HT8 127 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 DNAJC7Q99615 494 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 PPARGC1AQ9UBK2 798 aaKnown RBP5.13□□□□□ -1.59
SPG11-206ENST00000558093 PCDHB4Q9Y5E5 795 aa5.13□□□□□ -1.59
SPG11-206ENST00000558093 ARID1BQ8NFD5 2236 aaPredicted RBP5.12□□□□□ -1.59
SPG11-206ENST00000558093 AQP7O14520 342 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 FAM153BP0C7A2 387 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 GNAT1P11488 350 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 ATF2P15336 505 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 IGFBP6P24592 240 aaPredicted RBP5.12□□□□□ -1.59
SPG11-206ENST00000558093 CACNB2Q08289 660 aaPredicted RBP5.12□□□□□ -1.59
SPG11-206ENST00000558093 LBX2Q6XYB7 198 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 LCNL1Q6ZST4 164 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 MAMDC2Q7Z304 686 aaPredicted RBP5.12□□□□□ -1.59
SPG11-206ENST00000558093 B3GNT8Q7Z7M8 397 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms