RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 ZNF274Q96GC6 653 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 AP5M1Q9H0R1 490 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 ALDH8A1Q9H2A2 487 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 PDGFCQ9NRA1 345 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 GNEQ9Y223 722 aaKnown RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 NR2E3Q9Y5X4 410 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 DDX49Q9Y6V7 483 aaKnown RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 V9GY48 417 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-211ENST00000557623 PDE4DIPQ5VU43 2346 aa14.39□□□□□ -0.11
SLIRP-211ENST00000557623 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 MOXD2PA6NHM9 499 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 NKRFO15226 690 aaKnown RBP eCLIP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 ADCY6O43306 1168 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 NR3C2P08235 984 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 C6orf222P0C671 652 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 SMPD1P17405 629 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 PDIA3P30101 505 aaKnown RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 ADD1P35611 737 aaKnown RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 NKX3-2P78367 333 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 AKAP17AQ02040 695 aaKnown RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 TTLL4Q14679 1199 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 ANKRD1Q15327 319 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 DUSP28Q4G0W2 176 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 PRPF38BQ5VTL8 546 aaKnown RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 PPP1R18Q6NYC8 613 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 TEX2Q8IWB9 1127 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 PDCD2LQ9BRP1 358 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-211ENST00000557623 PSTPIP2Q9H939 334 aa14.38□□□□□ -0.11
SLIRP-211ENST00000557623 TNRC18O15417 2968 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-211ENST00000557623 ZEB2O60315 1214 aa14.37□□□□□ -0.11
SLIRP-211ENST00000557623 CCND2P30279 289 aa14.37□□□□□ -0.11
SLIRP-211ENST00000557623 PGM5Q15124 567 aa14.37□□□□□ -0.11
SLIRP-211ENST00000557623 GLT8D2Q9H1C3 349 aa14.37□□□□□ -0.11
SLIRP-211ENST00000557623 MEIS2O14770 477 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 PRPF3O43395 683 aaKnown RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 STAM2O75886 525 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 MYCLP12524 364 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 NAPAP54920 295 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 CCT2P78371 535 aaKnown RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 KCNA10Q16322 511 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 GNASQ5JWF2 1037 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 CCSAPQ6IQ19 270 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 KCNV1Q6PIU1 500 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 VSIG10LQ86VR7 867 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-211ENST00000557623 BARHL2Q9NY43 387 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 FRMPD4Q14CM0 1322 aa14.36□□□□□ -0.11
SLIRP-211ENST00000557623 A0A1W2PQ45 241 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-211ENST00000557623 A0A1W2PQY0 241 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 MYADML2A6NDP7 307 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 CPLX1O14810 134 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 TXNP10599 105 aaKnown RBP14.35□□□□□ -0.11
SLIRP-211ENST00000557623 SCG2P13521 617 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 IFNAR1P17181 557 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 ACLYP53396 1101 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 NTRK3Q16288 839 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 FSCN1Q16658 493 aaKnown RBP14.35□□□□□ -0.11
SLIRP-211ENST00000557623 LRRC26Q2I0M4 334 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-211ENST00000557623 USP17L6PQ6QN14 398 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 SLC39A5Q6ZMH5 540 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 CCDC12Q8WUD4 166 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-211ENST00000557623 GLT1D1Q96MS3 346 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
SLIRP-211ENST00000557623 SPDYE3A6NKU9 549 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 STXBP3O00186 592 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 CTAGE5O15320 804 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 CABYRO75952 493 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 ASGR1P07306 291 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 CPT1AP50416 773 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 ADCY7P51828 1080 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 SNX17Q15036 470 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 GNPTABQ3T906 1256 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 C1orf53Q5VUE5 145 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 XRRA1Q6P2D8 792 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 C7orf61Q8IZ16 206 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 OR6J1Q8NGC5 347 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-211ENST00000557623 NCOA5Q9HCD5 579 aaKnown RBP14.34□□□□□ -0.11
SLIRP-211ENST00000557623 RIC8AQ9NPQ8 531 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 STARD7Q9NQZ5 370 aa14.34□□□□□ -0.11
SLIRP-211ENST00000557623 MRVI1Q9Y6F6 885 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms