RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-216ENST00000557496 FAM26FQ5R3K3 315 aa4.46□□□□□ -1.7
FOXN3-216ENST00000557496 PRR31Q5SQ13 230 aa4.46□□□□□ -1.7
FOXN3-216ENST00000557496 RIOX2Q8IUF8 465 aa4.46□□□□□ -1.7
FOXN3-216ENST00000557496 LGR4Q9BXB1 951 aa4.46□□□□□ -1.7
FOXN3-216ENST00000557496 TMPRSS5Q9H3S3 457 aa4.46□□□□□ -1.7
FOXN3-216ENST00000557496 ZBTB7CA1YPR0 619 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 NOP56O00567 594 aaKnown RBP4.45□□□□□ -1.7
FOXN3-216ENST00000557496 PLATP00750 562 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 NCAPHQ15003 741 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 MROH9Q5TGP6 573 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 C9orf131Q5VYM1 1079 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 IQCEQ6IPM2 695 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 CD300LDQ6UXZ3 194 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 ZC3H18Q86VM9 953 aaKnown RBP4.45□□□□□ -1.7
FOXN3-216ENST00000557496 NLRP10Q86W26 655 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 CCDC103Q8IW40 242 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 FAM126BQ8IXS8 530 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 TTC9BQ8N6N2 239 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 TTLL6Q8N841 843 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 BTG4Q9NY30 223 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 X6R8D5 127 aa4.45□□□□□ -1.7
FOXN3-216ENST00000557496 ARNTLO00327 626 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 TBX1O43435 398 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 TNFRSF1AP19438 455 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 RPL11P62913 178 aaKnown RBP4.44□□□□□ -1.7
FOXN3-216ENST00000557496 KIAA2012Q0VF49 1180 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 E4F1Q66K89 784 aaPredicted RBP4.44□□□□□ -1.7
FOXN3-216ENST00000557496 STK32CQ86UX6 486 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 BTN2A2Q8WVV5 523 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 ANAPC16Q96DE5 110 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 MRRFQ96E11 262 aaKnown RBP4.44□□□□□ -1.7
FOXN3-216ENST00000557496 SAMD11Q96NU1 681 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 SSBP3Q9BWW4 388 aaPredicted RBP4.44□□□□□ -1.7
FOXN3-216ENST00000557496 C1QTNF3Q9BXJ4 246 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 TGIF2Q9GZN2 237 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 ACBD3Q9H3P7 528 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 TMEFF2Q9UIK5 374 aaPredicted RBP4.44□□□□□ -1.7
FOXN3-216ENST00000557496 INVSQ9Y283 1065 aa4.44□□□□□ -1.7
FOXN3-216ENST00000557496 TIMM13Q9Y5L4 95 aaPredicted RBP4.44□□□□□ -1.7
FOXN3-216ENST00000557496 MROH6A6NGR9 719 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 C1QTNF3-AMACRE9PGA6 284 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 SCG5P05408 212 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 STAT5AP42229 794 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 ADAM9Q13443 819 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 TESK1Q15569 626 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 CR1LQ2VPA4 569 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 CPZQ66K79 652 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 MCTP2Q6DN12 878 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 BORAQ6PGQ7 559 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 MILR1Q7Z6M3 343 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 LGI4Q8N135 537 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 TXNDC5Q8NBS9 432 aaKnown RBP4.43□□□□□ -1.7
FOXN3-216ENST00000557496 DIO2Q92813 273 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 PPP1R14AQ96A00 147 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 FBXL7Q9UJT9 491 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 ZNF652Q9Y2D9 606 aa4.43□□□□□ -1.7
FOXN3-216ENST00000557496 MATN3O15232 486 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 MEFVO15553 781 aaPredicted RBP4.42□□□□□ -1.7
FOXN3-216ENST00000557496 ITGAVP06756 1048 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 ZNF20P17024 532 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 ZNF28P17035 718 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 BCL6P41182 706 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 GTF2A2P52657 109 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 KCNAB2Q13303 367 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 ACBD5Q5T8D3 534 aaPredicted RBP4.42□□□□□ -1.7
FOXN3-216ENST00000557496 C6orf15Q6UXA7 325 aaPredicted RBP4.42□□□□□ -1.7
FOXN3-216ENST00000557496 CEP68Q76N32 757 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 FAM124AQ86V42 546 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 ZNF227Q86WZ6 799 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 KREMEN2Q8NCW0 462 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 TRMT2BQ96GJ1 504 aaKnown RBP4.42□□□□□ -1.7
FOXN3-216ENST00000557496 LOXL4Q96JB6 756 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 C8orf49Q96NF6 230 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 NGRNQ9NPE2 291 aaKnown RBP4.42□□□□□ -1.7
FOXN3-216ENST00000557496 KIAA1522Q9P206 1035 aaPredicted RBP4.42□□□□□ -1.7
FOXN3-216ENST00000557496 INPP5FQ9Y2H2 1132 aa4.42□□□□□ -1.7
FOXN3-216ENST00000557496 C9orf118A6NHY6 69 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 B2RBV5 119 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 DDX3XO00571 662 aaKnown RBP eCLIP4.41□□□□□ -1.7
FOXN3-216ENST00000557496 MYO1BO43795 1136 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 SNRPB2P08579 225 aaKnown RBP4.41□□□□□ -1.7
FOXN3-216ENST00000557496 ATF4P18848 351 aaPredicted RBP4.41□□□□□ -1.7
FOXN3-216ENST00000557496 HOXC12P31275 282 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 NKX3-2P78367 333 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 PRSS53Q2L4Q9 553 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 RCBTB1Q8NDN9 531 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 TMEM169Q96HH4 297 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
FOXN3-216ENST00000557496 H7BY64 318 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 SMAD7O15105 426 aaKnown RBP4.4□□□□□ -1.71
FOXN3-216ENST00000557496 SUSD5O60279 629 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 B4GALT3O60512 393 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 CPP00450 1065 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 ECI1P42126 302 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 GFRA1P56159 465 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 SF1Q15637 639 aaKnown RBP4.4□□□□□ -1.71
FOXN3-216ENST00000557496 CHRNA2Q15822 529 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 EMC4Q5J8M3 183 aa4.4□□□□□ -1.71
FOXN3-216ENST00000557496 FAM178BQ8IXR5 827 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms