RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TLK2Q86UE8 772 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 DHX37Q8IY37 1157 aaKnown RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 FAM133AQ8N9E0 248 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 CHST13Q8NET6 341 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 PANK1Q8TE04 598 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 SCLYQ96I15 445 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 HAUS7Q99871 368 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 POLR3EQ9NVU0 708 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 ARPP21Q9UBL0 812 aaPredicted RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 GNEQ9Y223 722 aaKnown RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 PCDHA11Q9Y5I1 949 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 PRRC2BQ5JSZ5 2229 aaKnown RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 TCF20Q9UGU0 1960 aaKnown RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 PIEZO1Q92508 2521 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 EPOPA6NHQ4 379 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 LRRC37A2A6NM11 1700 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 RFXAPO00287 272 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 ERC2O15083 957 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 CA3P07451 260 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 SMPD1P17405 629 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 ATP5JP18859 108 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 OAZ1P54368 228 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PRR20EP86478 221 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PRR20CP86479 221 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PRR20DP86480 221 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PRR20BP86481 221 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PRR20AP86496 221 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 FOXC1Q12948 553 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 TTLL4Q14679 1199 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 AAK1Q2M2I8 961 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 TMEM63BQ5T3F8 832 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 KRT40Q6A162 431 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 LRRC47Q8N1G4 583 aaKnown RBP6.97□□□□□ -1.29
VPS33B-207ENST00000557470 CEP95Q96GE4 821 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 AGBL1Q96MI9 1066 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 STRBPQ96SI9 672 aaKnown RBP6.97□□□□□ -1.29
VPS33B-207ENST00000557470 USB1Q9BQ65 265 aaKnown RBP6.97□□□□□ -1.29
VPS33B-207ENST00000557470 ALDH8A1Q9H2A2 487 aaPredicted RBP6.97□□□□□ -1.29
VPS33B-207ENST00000557470 EPHX3Q9H6B9 360 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 ACAD9Q9H845 621 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 CERS4Q9HA82 394 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 MKNK2Q9HBH9 465 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PRM3Q9NNZ6 103 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PDGFCQ9NRA1 345 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 PKD2L1Q9P0L9 805 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 FEM1BQ9UK73 627 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 MTCH2Q9Y6C9 303 aa6.97□□□□□ -1.29
VPS33B-207ENST00000557470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 ASB14A6NK59 587 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 MINDY4BA8MYZ0 360 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 TMEM232C9JQI7 657 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 CCER2I3L3R5 266 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 DYNC1LI2O43237 492 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 PRDM1O75626 825 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 ARHGEF15O94989 841 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 CYP2C9P11712 490 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 RFX1P22670 979 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 USP46P62068 366 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 SBK1Q52WX2 424 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 TMEM67Q5HYA8 995 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 TAPT1Q6NXT6 567 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 FBXO16Q8IX29 292 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 RPUSD2Q8IZ73 545 aaKnown RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 GMCL1P1Q8NEA9 526 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 MKL1Q969V6 931 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 DRC1Q96MC2 740 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 LRFN3Q9BTN0 628 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 SEZ6LQ9BYH1 1024 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 AP5M1Q9H0R1 490 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 RNF146Q9NTX7 359 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.3
VPS33B-207ENST00000557470 MTMR4Q9NYA4 1195 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 SYNPO2Q9UMS6 1093 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 ZNF536O15090 1300 aa6.96□□□□□ -1.3
VPS33B-207ENST00000557470 MYH7P12883 1935 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 MUC6Q6W4X9 2439 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 POM121CA8CG34 1229 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 ZEB2O60315 1214 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 RAB11FIP3O75154 756 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 HMMRO75330 724 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 TTLL1O95922 423 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 PFKMP08237 780 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 BMP3P12645 472 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 POU3F3P20264 500 aaPredicted RBP6.95□□□□□ -1.3
VPS33B-207ENST00000557470 RFC5P40937 340 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 ABL2P42684 1182 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 RPIAP49247 311 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 MMP16P51512 607 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 STAT2P52630 851 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 SNAP25P60880 206 aa6.95□□□□□ -1.3
VPS33B-207ENST00000557470 TMEM259Q4ZIN3 620 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms