RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 KCTD1Q719H9 257 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 SH3BP5LQ7L8J4 393 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 CLEC10AQ8IUN9 316 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ZFPM1Q8IX07 1006 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 CCDC170Q8IYT3 715 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 KIAA0895Q8NCT3 520 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 CRYGNQ8WXF5 182 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 CNOT6LQ96LI5 555 aaKnown RBP9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 WDR24Q96S15 920 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 TSG101Q99816 390 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ANO3Q9BYT9 981 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 EDEM3Q9BZQ6 932 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 TTYH3Q9C0H2 523 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 MRPL44Q9H9J2 332 aaKnown RBP9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 KCNMB3Q9NPA1 279 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 DDX41Q9UJV9 622 aaKnown RBP9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 PCDHA1Q9Y5I3 950 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 EPN1Q9Y6I3 576 aaPredicted RBP9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ATAD5Q96QE3 1844 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 TTC26A0AVF1 554 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 F5H6K3 240 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 GNA14O95837 355 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CYP3A4P08684 503 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 HNRNPH3P31942 346 aaKnown RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CIITAP33076 1130 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CYLC1P35663 651 aaPredicted RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 SLC16A2P36021 539 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 MTIF2P46199 727 aaKnown RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 KLRC3Q07444 240 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 TBC1D8BQ0IIM8 1120 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 MTF1Q14872 753 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 MAN2A1Q16706 1144 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 UBE2SQ16763 222 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 SYDE2Q5VT97 1194 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 FKBP1CQ5VVH2 108 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 HAUS3Q68CZ6 603 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 FBXO11Q86XK2 927 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 SIAH1Q8IUQ4 282 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CCDC65Q8IXS2 484 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 SMAP1Q8IYB5 467 aaPredicted RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CEP112Q8N8E3 955 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 ERMNQ8TAM6 284 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 RABGGTAQ92696 567 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 DDX12PQ92771 950 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 FAM20AQ96MK3 541 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CEP63Q96MT8 703 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 DESI2Q9BSY9 194 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 NOC4LQ9BVI4 516 aaKnown RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 SEMA6BQ9H3T3 888 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 HAUS4Q9H6D7 363 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 KCNQ5Q9NR82 932 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 ZNHIT6Q9NWK9 470 aaKnown RBP9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 TMOD2Q9NZR1 351 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 PITPNM2Q9BZ72 1349 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.82
PPP4R3A-212ENST00000557382 CTAGE9A4FU28 777 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 POTEMA6NI47 508 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 B4DLN1 442 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 PIK3CDO00329 1044 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 MEIS2O14770 477 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 FANCGO15287 622 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 PLA2G6O60733 806 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 COBLO75128 1261 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 NDUFA10O95299 355 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 FCER1AP12319 257 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 BMP3P12645 472 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 PRKCSHP14314 528 aaPredicted RBP9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 RXRBP28702 533 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 SREBF1P36956 1147 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 PPP2R3AQ06190 1150 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 TCP10Q12799 353 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 SLC15A2Q16348 729 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 ERCC6LQ2NKX8 1250 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 VWA3BQ502W6 1294 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 MIIPQ5JXC2 388 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 FBXO38Q6PIJ6 1188 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 RSRC2Q7L4I2 434 aaKnown RBP9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 DNAJC19Q96DA6 116 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 PSMD1Q99460 953 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 CARD6Q9BX69 1037 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 ARHGEF10LQ9HCE6 1279 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 STK32BQ9NY57 414 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 FAM53CQ9NYF3 392 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 CDC23Q9UJX2 597 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 HDAC9Q9UKV0 1011 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 LOXHD1Q8IVV2 1947 aa9.95□□□□□ -0.82
PPP4R3A-212ENST00000557382 FRMD3A2A2Y4 597 aa9.94□□□□□ -0.82
PPP4R3A-212ENST00000557382 EIF3CLB5ME19 914 aaKnown RBP9.94□□□□□ -0.82
PPP4R3A-212ENST00000557382 RNF225M0QZC1 329 aaPredicted RBP9.94□□□□□ -0.82
PPP4R3A-212ENST00000557382 PPIP5K2O43314 1243 aa9.94□□□□□ -0.82
PPP4R3A-212ENST00000557382 TBC1D12O60347 775 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms