RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 TRIP12Q14669 1992 aaPredicted RBP11.88□□□□□ -0.51
APEX1-218ENST00000557344 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 NFIBO00712 420 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 ORC4O43929 436 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 NBNO60934 754 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 NOVP48745 357 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 RBL2Q08999 1139 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 GDF6Q6KF10 455 aaPredicted RBP11.88□□□□□ -0.51
APEX1-218ENST00000557344 LRRC8DQ7L1W4 858 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 SESTD1Q86VW0 696 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 SCFD2Q8WU76 684 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 DHX38Q92620 1227 aaKnown RBP11.88□□□□□ -0.51
APEX1-218ENST00000557344 COPS5Q92905 334 aa11.88□□□□□ -0.51
APEX1-218ENST00000557344 MRPL38Q96DV4 380 aaKnown RBP11.88□□□□□ -0.51
APEX1-218ENST00000557344 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 H3BQ06 376 aaPredicted RBP11.87□□□□□ -0.51
APEX1-218ENST00000557344 NMT2O60551 498 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 EFCAB14O75071 495 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 CKBP12277 381 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 EDNRBP24530 442 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 ZP2Q05996 745 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 PDE4DQ08499 809 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 HFE2Q6ZVN8 426 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 RASGRP2Q7LDG7 609 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 FBXO22Q8NEZ5 403 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 C17orf80Q9BSJ5 609 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 RANBP17Q9H2T7 1088 aaKnown RBP11.87□□□□□ -0.51
APEX1-218ENST00000557344 PRKAG3Q9UGI9 489 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 CTNNA3Q9UI47 895 aa11.87□□□□□ -0.51
APEX1-218ENST00000557344 ZNF318Q5VUA4 2279 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 SIP14410 1827 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 TXNP10599 105 aaKnown RBP11.86□□□□□ -0.51
APEX1-218ENST00000557344 GSPT1P15170 499 aaKnown RBP11.86□□□□□ -0.51
APEX1-218ENST00000557344 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 IKBKEQ14164 716 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 COL19A1Q14993 1142 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 FAM117BQ6P1L5 589 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 CWC27Q6UX04 472 aaKnown RBP11.86□□□□□ -0.51
APEX1-218ENST00000557344 SLC30A10Q6XR72 485 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 PABPC5Q96DU9 382 aaKnown RBP11.86□□□□□ -0.51
APEX1-218ENST00000557344 IL25Q9H293 177 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 FAM50BQ9Y247 325 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 INSL6Q9Y581 213 aa11.86□□□□□ -0.51
APEX1-218ENST00000557344 WDFY4Q6ZS81 3184 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 TSPY2A6NKD2 308 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 RANBP6O60518 1105 aaKnown RBP11.85□□□□□ -0.51
APEX1-218ENST00000557344 ARIH2O95376 493 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 CALML3P27482 149 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 SLC16A2P36021 539 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 HAND2P61296 217 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 PTPROQ16827 1216 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 CCDC62Q6P9F0 684 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 ADHFE1Q8IWW8 467 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 AFG1LQ8WV93 481 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 KAT2BQ92831 832 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 MFSD14AQ96MC6 490 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
APEX1-218ENST00000557344 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
APEX1-218ENST00000557344 RBAK-RBAKDNI3L0D1 243 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 HIP1O00291 1037 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 MMP3P08254 477 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 IRS1P35568 1242 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
APEX1-218ENST00000557344 RPS6P62753 249 aaKnown RBP11.84□□□□□ -0.51
APEX1-218ENST00000557344 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
APEX1-218ENST00000557344 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
APEX1-218ENST00000557344 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 TIGD5Q53EQ6 642 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 TCEAL5Q5H9L2 206 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 TRAF7Q6Q0C0 670 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
APEX1-218ENST00000557344 RNF207Q6ZRF8 634 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 TBC1D10CQ8IV04 446 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 BANK1Q8NDB2 785 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 SP7Q8TDD2 431 aaPredicted RBP11.84□□□□□ -0.51
APEX1-218ENST00000557344 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 MPHOSPH6Q99547 160 aaKnown RBP11.84□□□□□ -0.51
APEX1-218ENST00000557344 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 GTF2IRD1Q9UHL9 959 aa11.84□□□□□ -0.51
APEX1-218ENST00000557344 H3BNC9 293 aa11.83□□□□□ -0.52
APEX1-218ENST00000557344 PCP11498 1178 aaKnown RBP11.83□□□□□ -0.52
APEX1-218ENST00000557344 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.52
APEX1-218ENST00000557344 ARHGAP1Q07960 439 aa11.83□□□□□ -0.52
APEX1-218ENST00000557344 PTK7Q13308 1070 aa11.83□□□□□ -0.52
APEX1-218ENST00000557344 CCDC96Q2M329 555 aa11.83□□□□□ -0.52
APEX1-218ENST00000557344 TRIM71Q2Q1W2 868 aaKnown RBP11.83□□□□□ -0.52
APEX1-218ENST00000557344 RRP12Q5JTH9 1297 aaKnown RBP11.83□□□□□ -0.52
APEX1-218ENST00000557344 ZNF618Q5T7W0 954 aa11.83□□□□□ -0.52
APEX1-218ENST00000557344 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
APEX1-218ENST00000557344 SAMD11Q96NU1 681 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms