RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 MYLIPQ8WY64 445 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 KIFC2Q96AC6 838 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
VRK1-206ENST00000557222 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
VRK1-206ENST00000557222 TTC41PQ6P2S7 1318 aa10.29□□□□□ -0.76
VRK1-206ENST00000557222 ERC2O15083 957 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 APPP05067 770 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 ASGR1P07306 291 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 C6orf222P0C671 652 aaPredicted RBP10.28□□□□□ -0.76
VRK1-206ENST00000557222 TSPY3P0CV98 308 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 TSPY8P0CW00 308 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 STAT2P52630 851 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 SLFN13Q68D06 897 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
VRK1-206ENST00000557222 FAM133AQ8N9E0 248 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 SLC43A3Q8NBI5 491 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 LENG1Q96BZ8 264 aaPredicted RBP10.28□□□□□ -0.76
VRK1-206ENST00000557222 FGD4Q96M96 766 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 KATNBL1Q9H079 304 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 ACAD9Q9H845 621 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 Q9Y3F1 56 aa10.28□□□□□ -0.76
VRK1-206ENST00000557222 BDP1A6H8Y1 2624 aa10.27□□□□□ -0.76
VRK1-206ENST00000557222 MYH4Q9Y623 1939 aa10.27□□□□□ -0.76
VRK1-206ENST00000557222 LOC102724159A0A0B4J2E5 919 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 TMEM232C9JQI7 657 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 ZEB2O60315 1214 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 CD4P01730 458 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 PWP2Q15269 919 aaKnown RBP10.27□□□□□ -0.77
VRK1-206ENST00000557222 TMEM240Q5SV17 173 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 IQSEC1Q6DN90 963 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 FAM126BQ8IXS8 530 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 CCDC144CPQ8IYA2 1237 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 TIFAQ96CG3 184 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 CDK15Q96Q40 435 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.27□□□□□ -0.77
VRK1-206ENST00000557222 ZNF576Q9H609 170 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 MUC3AQ02505 3323 aa10.27□□□□□ -0.77
VRK1-206ENST00000557222 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 M0R2C6 588 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 CTAGE5O15320 804 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 ADCY6O43306 1168 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 PRDM1O75626 825 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 AP1G2O75843 785 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 SLC1A4P43007 532 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 TFAP4Q01664 338 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 TNFAIP2Q03169 654 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 NNTQ13423 1086 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 GRIN2CQ14957 1233 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 ZMYM1Q5SVZ6 1142 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 AKNAD1Q5T1N1 836 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 C16orf59Q7L2K0 433 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 STK11IPQ8N1F8 1099 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 HERVK_113Q902F9 699 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 NAPBQ9H115 298 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
VRK1-206ENST00000557222 IL23AQ9NPF7 189 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 A1CFQ9NQ94 594 aaKnown RBP10.26□□□□□ -0.77
VRK1-206ENST00000557222 GNEQ9Y223 722 aaKnown RBP10.26□□□□□ -0.77
VRK1-206ENST00000557222 CHD7Q9P2D1 2997 aa10.26□□□□□ -0.77
VRK1-206ENST00000557222 MCM3APO60318 1980 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 CAPN5O15484 640 aaPredicted RBP10.25□□□□□ -0.77
VRK1-206ENST00000557222 NOVP48745 357 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 CNTN2Q02246 1040 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 PPARAQ07869 468 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 ARID5BQ14865 1188 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 RAB30Q15771 203 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 C20orf194Q5TEA3 1177 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 LRRC47Q8N1G4 583 aaKnown RBP10.25□□□□□ -0.77
VRK1-206ENST00000557222 MORC4Q8TE76 937 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
VRK1-206ENST00000557222 AP5M1Q9H0R1 490 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 RNF146Q9NTX7 359 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 ANAPC4Q9UJX5 808 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 PNMA2Q9UL42 364 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
VRK1-206ENST00000557222 ZNF536O15090 1300 aa10.25□□□□□ -0.77
VRK1-206ENST00000557222 TRANK1O15050 2925 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 ADH1CP00326 375 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 FGBP02675 491 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 FGRP09769 529 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 CSF2RAP15509 400 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 MCCP23508 829 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 FSCN1Q16658 493 aaKnown RBP10.24□□□□□ -0.77
VRK1-206ENST00000557222 ZNF365Q70YC5 407 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 RPUSD2Q8IZ73 545 aaKnown RBP10.24□□□□□ -0.77
VRK1-206ENST00000557222 PI4K2BQ8TCG2 481 aa10.24□□□□□ -0.77
VRK1-206ENST00000557222 ATXN2LQ8WWM7 1075 aaKnown RBP10.24□□□□□ -0.77
VRK1-206ENST00000557222 GPKOWQ92917 476 aaPredicted RBP eCLIP10.24□□□□□ -0.77
VRK1-206ENST00000557222 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms