RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GPR161Q8N6U8 529 aaKnown RBP17.02■□□□□ 0.31
TMEM55B-207ENST00000557041 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.31
TMEM55B-207ENST00000557041 CCDC51Q96ER9 411 aa17.02■□□□□ 0.31
TMEM55B-207ENST00000557041 SH2D3AQ9BRG2 576 aa17.02■□□□□ 0.31
TMEM55B-207ENST00000557041 USP8P40818 1118 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 GPATCH4Q5T3I0 446 aaKnown RBP17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 FANCGO15287 622 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 GCNT3O95395 438 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 RASSF7Q02833 373 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 SMC1AQ14683 1233 aaKnown RBP17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 GIMAP8Q8ND71 665 aaPredicted RBP17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 RABEP2Q9H5N1 569 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.01■□□□□ 0.312e-8■■■■□ 22.4
TMEM55B-207ENST00000557041 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 SAR1BQ9Y6B6 198 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 MYH13Q9UKX3 1938 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 ZNF185O15231 689 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 ECE2O60344 883 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 APBA1Q02410 837 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 LSM14BQ9BX40 385 aaKnown RBP17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 KBTBD4Q9NVX7 518 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 PI4KBQ9UBF8 816 aa17.01■□□□□ 0.31
TMEM55B-207ENST00000557041 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 TMCO5BA8MYB1 307 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 SORBS3O60504 671 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 RHOBTB3O94955 611 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 IL1R1P14778 569 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 EIF4A3P38919 411 aaKnown RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 MAP3K9P80192 1104 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 TMC4Q7Z404 712 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 ANO3Q9BYT9 981 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 DNM3Q9UQ16 869 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.31
TMEM55B-207ENST00000557041 TACC1O75410 805 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 PLA2G4BP0C869 781 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 ADAM9Q13443 819 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 KCTD19Q17RG1 926 aaPredicted RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 GSPT2Q8IYD1 628 aaKnown RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 SECISBP2LQ93073 1101 aaKnown RBP17■□□□□ 0.31
TMEM55B-207ENST00000557041 GRB10Q13322 594 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 SYCP3Q8IZU3 236 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 ERMNQ8TAM6 284 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 THAP9Q9H5L6 903 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 MLXIPQ9HAP2 919 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 ZNF446Q9NWS9 450 aa17■□□□□ 0.31
TMEM55B-207ENST00000557041 COL4A1P02462 1669 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 MOCS3O95396 460 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 SRGNP10124 158 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 CRAMP1Q96RY5 1269 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 TTI2Q6NXR4 508 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 DNAAF5Q86Y56 855 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 IRF2BP1Q8IU81 584 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 ELOA2Q8IYF1 753 aaPredicted RBP16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 LRRC15Q8TF66 581 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 MASTLQ96GX5 879 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 BHMT2Q9H2M3 363 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 SMARCAL1Q9NZC9 954 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 RGL1Q9NZL6 768 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 MYH3P11055 1940 aa16.99■□□□□ 0.31
TMEM55B-207ENST00000557041 ATP1A1P05023 1023 aaKnown RBP16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 NOA1Q8NC60 698 aaKnown RBP16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 KIAA0895Q8NCT3 520 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 AMNQ9BXJ7 453 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 LACRTQ9GZZ8 138 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 PDE11AQ9HCR9 933 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 SHMT1P34896 483 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 KCNJ6P48051 423 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 CYP2W1Q8TAV3 490 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 SEMA6BQ9H3T3 888 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 PAFAH1B1P43034 410 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 RAD54LQ92698 747 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 ALS2CR12Q96Q35 445 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 RUFY1Q96T51 708 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 LRRC27Q9C0I9 530 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 SWAP70Q9UH65 585 aa16.98■□□□□ 0.31
TMEM55B-207ENST00000557041 CETN3O15182 167 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 EIF3JO75822 258 aaKnown RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 FAM13AO94988 1023 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 NR2F2P24468 414 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 APTXQ7Z2E3 356 aaKnown RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 RABGGTAQ92696 567 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 DUSP9Q99956 384 aaKnown RBP16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 HAUS4Q9H6D7 363 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 MYH7P12883 1935 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 LRRC53A6NM62 1247 aa16.97■□□□□ 0.31
TMEM55B-207ENST00000557041 KLRC4O43908 158 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms