RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 IL27Q8NEV9 243 aa25.89■■□□□ 1.74
PABPN1-206ENST00000556809 PHKBQ93100 1093 aa25.89■■□□□ 1.74
PABPN1-206ENST00000556809 GLT1D1Q96MS3 346 aa25.89■■□□□ 1.74
PABPN1-206ENST00000556809 PCDH10Q9P2E7 1040 aa25.89■■□□□ 1.74
PABPN1-206ENST00000556809 PIK3CDO00329 1044 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 MEIS2O14770 477 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 EIF3JO75822 258 aaKnown RBP25.88■■□□□ 1.73
PABPN1-206ENST00000556809 LARGE1O95461 756 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 TLE2Q04725 743 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 TTLL4Q14679 1199 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 PGM5Q15124 567 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 CPLX2Q6PUV4 134 aaKnown RBP25.88■■□□□ 1.73
PABPN1-206ENST00000556809 HEATR3Q7Z4Q2 680 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 VSIG10LQ86VR7 867 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 RNF26Q9BY78 433 aaPredicted RBP25.88■■□□□ 1.73
PABPN1-206ENST00000556809 RBM27Q9P2N5 1060 aaKnown RBP25.88■■□□□ 1.73
PABPN1-206ENST00000556809 LIMCH1Q9UPQ0 1083 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 LTBP2Q14767 1821 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 FRMPD4Q14CM0 1322 aa25.88■■□□□ 1.73
PABPN1-206ENST00000556809 PRPF3O43395 683 aaKnown RBP25.87■■□□□ 1.73
PABPN1-206ENST00000556809 ST18O60284 1047 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 RGS20O76081 388 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 TXNP10599 105 aaKnown RBP25.87■■□□□ 1.73
PABPN1-206ENST00000556809 CDK7P50613 346 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 SEPT14Q6ZU15 432 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 ANKRD33Q7Z3H0 272 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 FCHSD1Q86WN1 690 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 IL31RAQ8NI17 732 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 COPS5Q92905 334 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 GPKOWQ92917 476 aaPredicted RBP eCLIP25.87■■□□□ 1.732e-8■□□□□ 11
PABPN1-206ENST00000556809 TOX2Q96NM4 488 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 SLC26A6Q9BXS9 759 aa25.87■■□□□ 1.73
PABPN1-206ENST00000556809 AKAP17AQ02040 695 aaKnown RBP25.86■■□□□ 1.73
PABPN1-206ENST00000556809 WWC2Q6AWC2 1192 aa25.86■■□□□ 1.73
PABPN1-206ENST00000556809 USP17L6PQ6QN14 398 aa25.86■■□□□ 1.73
PABPN1-206ENST00000556809 CXCL17Q6UXB2 119 aa25.86■■□□□ 1.73
PABPN1-206ENST00000556809 PDLIM7Q9NR12 457 aa25.86■■□□□ 1.73
PABPN1-206ENST00000556809 hCG_1984214I3L0E3 225 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 PPFIA3O75145 1194 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 BMP8BP34820 402 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 MAGEA10P43363 369 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-206ENST00000556809 PFKFB3Q16875 520 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-206ENST00000556809 TRIM22Q8IYM9 498 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 ZNF713Q8N859 430 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-206ENST00000556809 NECAB1Q8N987 351 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 SLC43A3Q8NBI5 491 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 OR6J1Q8NGC5 347 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 GTF3C6Q969F1 213 aa25.85■■□□□ 1.73
PABPN1-206ENST00000556809 DDX41Q9UJV9 622 aaKnown RBP25.85■■□□□ 1.73
PABPN1-206ENST00000556809 A0A0U1RQG5 324 aaPredicted RBP25.84■■□□□ 1.73
PABPN1-206ENST00000556809 A6NJR5 290 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 ZEB2O60315 1214 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 CABYRO75952 493 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 CDKL5O76039 1030 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 MYCLP12524 364 aaPredicted RBP25.84■■□□□ 1.73
PABPN1-206ENST00000556809 SCG2P13521 617 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 RANBP2P49792 3224 aaKnown RBP25.84■■□□□ 1.73
PABPN1-206ENST00000556809 SH3RF1Q7Z6J0 888 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 GRIN2DO15399 1336 aa25.84■■□□□ 1.73
PABPN1-206ENST00000556809 TRIM43BA6NCK2 446 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 ARVCFO00192 962 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 CPT1AP50416 773 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 SSRP1Q08945 709 aaKnown RBP25.83■■□□□ 1.73
PABPN1-206ENST00000556809 PKN1Q16512 942 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 LY6KQ17RY6 165 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 TYW1BQ6NUM6 668 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 PPP1R18Q6NYC8 613 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 TRIM43Q96BQ3 446 aaPredicted RBP25.83■■□□□ 1.73
PABPN1-206ENST00000556809 ZSCAN31Q96LW9 406 aaPredicted RBP25.83■■□□□ 1.73
PABPN1-206ENST00000556809 PSTPIP2Q9H939 334 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 BARHL2Q9NY43 387 aa25.83■■□□□ 1.73
PABPN1-206ENST00000556809 MYH7BA7E2Y1 1941 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 STXBP3O00186 592 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 PQBP1O60828 265 aaKnown RBP25.82■■□□□ 1.72
PABPN1-206ENST00000556809 CCND2P30279 289 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 NAPAP54920 295 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 MRPS9P82933 396 aaKnown RBP25.82■■□□□ 1.72
PABPN1-206ENST00000556809 PURAQ00577 322 aaKnown RBP25.82■■□□□ 1.72
PABPN1-206ENST00000556809 ARHGAP1Q07960 439 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 FAAP100Q0VG06 881 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 SMARCC2Q8TAQ2 1214 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 CUL5Q93034 780 aa25.82■■□□□ 1.72
PABPN1-206ENST00000556809 CLTBP09497 229 aa25.81■■□□□ 1.72
PABPN1-206ENST00000556809 VTI1AQ96AJ9 217 aa25.81■■□□□ 1.72
PABPN1-206ENST00000556809 POLR3EQ9NVU0 708 aa25.81■■□□□ 1.72
PABPN1-206ENST00000556809 PRKAG2Q9UGJ0 569 aa25.81■■□□□ 1.72
PABPN1-206ENST00000556809 SCN10AQ9Y5Y9 1956 aa25.81■■□□□ 1.72
PABPN1-206ENST00000556809 TRIOBPQ9H2D6 2365 aa25.81■■□□□ 1.72
PABPN1-206ENST00000556809 A0A1W2PPC1 479 aa25.8■■□□□ 1.72
PABPN1-206ENST00000556809 CTDNEP1O95476 244 aa25.8■■□□□ 1.72
PABPN1-206ENST00000556809 GH1P01241 217 aa25.8■■□□□ 1.72
PABPN1-206ENST00000556809 MDM2Q00987 491 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-206ENST00000556809 EMID1Q96A84 441 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-206ENST00000556809 ZFP91Q96JP5 570 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-206ENST00000556809 PRDM5Q9NQX1 630 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-206ENST00000556809 SH2B1Q9NRF2 756 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-206ENST00000556809 MRVI1Q9Y6F6 885 aa25.8■■□□□ 1.72
PABPN1-206ENST00000556809 MROH7Q68CQ1 1323 aa25.8■■□□□ 1.72
PABPN1-206ENST00000556809 DCDC2CA8MYV0 355 aa25.79■■□□□ 1.72
PABPN1-206ENST00000556809 KIAA0355O15063 1070 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms