RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 AGXT2Q9BYV1 514 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.5
SNX6-208ENST00000556712 A0A0U1RQG5 324 aaPredicted RBP11.95□□□□□ -0.5
SNX6-208ENST00000556712 SEC24BO95487 1268 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 MYL3P08590 195 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 CLTBP09497 229 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 CCND2P30279 289 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 RCAN1P53805 252 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 NAPAP54920 295 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 CCT2P78371 535 aaKnown RBP11.95□□□□□ -0.5
SNX6-208ENST00000556712 CCDC62Q6P9F0 684 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 PHKBQ93100 1093 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 GDF15Q99988 308 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
SNX6-208ENST00000556712 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
SNX6-208ENST00000556712 Q9Y3F1 56 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 CYP46A1Q9Y6A2 500 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 MRVI1Q9Y6F6 885 aa11.95□□□□□ -0.5
SNX6-208ENST00000556712 V9GY48 417 aaPredicted RBP11.95□□□□□ -0.5
SNX6-208ENST00000556712 GRIN2DO15399 1336 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 ELP1O95163 1332 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 STXBP3O00186 592 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 NKRFO15226 690 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNX6-208ENST00000556712 EIF3JO75822 258 aaKnown RBP11.94□□□□□ -0.5
SNX6-208ENST00000556712 ITGB8P26012 769 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 CPT1AP50416 773 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 ARHGAP1Q07960 439 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 FBXL16Q8N461 479 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 SAMD3Q8N6K7 520 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 AFG1LQ8WV93 481 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 CUL5Q93034 780 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 PSTPIP2Q9H939 334 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 DDX41Q9UJV9 622 aaKnown RBP11.94□□□□□ -0.5
SNX6-208ENST00000556712 TRIOBPQ9H2D6 2365 aa11.94□□□□□ -0.5
SNX6-208ENST00000556712 ARVCFO00192 962 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 PIK3CDO00329 1044 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 ZEB2O60315 1214 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 GH1P01241 217 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 MMP3P08254 477 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
SNX6-208ENST00000556712 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
SNX6-208ENST00000556712 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
SNX6-208ENST00000556712 PURAQ00577 322 aaKnown RBP11.93□□□□□ -0.5
SNX6-208ENST00000556712 FAAP100Q0VG06 881 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 STK3Q13188 491 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 ANKRD33Q7Z3H0 272 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 VSIG10LQ86VR7 867 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 FAM126BQ8IXS8 530 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 BADQ92934 168 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 UBE2OQ9C0C9 1292 aaKnown RBP11.93□□□□□ -0.5
SNX6-208ENST00000556712 PDRG1Q9NUG6 133 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 RTEL1Q9NZ71 1219 aa11.93□□□□□ -0.5
SNX6-208ENST00000556712 A6NJR5 290 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 DCDC2CA8MYV0 355 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 ADAMTS3O15072 1205 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 DTNBO60941 627 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 GGPS1O95749 300 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 CDK7P50613 346 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 SP2Q02086 613 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 NTRK3Q16288 839 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 INPP4AQ96PE3 977 aaPredicted RBP11.92□□□□□ -0.5
SNX6-208ENST00000556712 LBHD1Q9BQE6 289 aaPredicted RBP11.92□□□□□ -0.5
SNX6-208ENST00000556712 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
SNX6-208ENST00000556712 BCAS3Q9H6U6 928 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 TMEM260Q9NX78 707 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 BARHL2Q9NY43 387 aa11.92□□□□□ -0.5
SNX6-208ENST00000556712 TANC1Q9C0D5 1861 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 MROH7Q68CQ1 1323 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 RANBP2P49792 3224 aaKnown RBP11.91□□□□□ -0.5
SNX6-208ENST00000556712 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 B4GALT4O60513 344 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 CABYRO75952 493 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 ZNF286BP0CG31 522 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 SCG2P13521 617 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 FXR1P51114 621 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNX6-208ENST00000556712 ADCY7P51828 1080 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 EVCP57679 992 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 PKN1Q16512 942 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
SNX6-208ENST00000556712 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 PCNX4Q63HM2 1172 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
SNX6-208ENST00000556712 TOX2Q96NM4 488 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 SLC26A6Q9BXS9 759 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
SNX6-208ENST00000556712 TRPV6Q9H1D0 765 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms