RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 REXO1Q8N1G1 1221 aaKnown RBP4.83□□□□□ -1.64
RDH11-208ENST00000556692 KYQ8NBH2 561 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 RGS22Q8NE09 1264 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 NKD1Q969G9 470 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 PEX11GQ96HA9 241 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 DSCC1Q9BVC3 393 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 MKRN2Q9H000 416 aaKnown RBP4.83□□□□□ -1.64
RDH11-208ENST00000556692 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 PCDHB12Q9Y5F1 795 aa4.83□□□□□ -1.64
RDH11-208ENST00000556692 RUSC2Q8N2Y8 1516 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 VPS8Q8N3P4 1428 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 FAM86C2PA6NEL3 165 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 CYP1A1P04798 512 aaPredicted RBP4.82□□□□□ -1.64
RDH11-208ENST00000556692 CCNFP41002 786 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 HS1BP3Q53T59 392 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 CWF19L1Q69YN2 538 aaKnown RBP4.82□□□□□ -1.64
RDH11-208ENST00000556692 STK32CQ86UX6 486 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 SLC9A7Q96T83 725 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 SYT3Q9BQG1 590 aa4.82□□□□□ -1.64
RDH11-208ENST00000556692 KIF13AQ9H1H9 1805 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 CTTNBP2Q8WZ74 1663 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 C8BP07358 591 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 ZEB1P37275 1124 aaPredicted RBP4.81□□□□□ -1.64
RDH11-208ENST00000556692 EPHB4P54760 987 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 LRRFIP1Q32MZ4 808 aaKnown RBP4.81□□□□□ -1.64
RDH11-208ENST00000556692 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 RNF207Q6ZRF8 634 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 SLITRK4Q8IW52 837 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 TTLL6Q8N841 843 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 TMEM87AQ8NBN3 555 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 Q8TCH9 128 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 NEU4Q8WWR8 484 aaPredicted RBP4.81□□□□□ -1.64
RDH11-208ENST00000556692 ZNF503Q96F45 646 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 SLC6A18Q96N87 628 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 NT5C1AQ9BXI3 368 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 SLC12A9Q9BXP2 914 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 PCGF6Q9BYE7 350 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 KDM6BO15054 1643 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 EIF4G3O43432 1585 aaKnown RBP4.81□□□□□ -1.64
RDH11-208ENST00000556692 MAP3K1Q13233 1512 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 RAPGEF2Q9Y4G8 1499 aa4.81□□□□□ -1.64
RDH11-208ENST00000556692 MEIS3P2A8K0S8 358 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 TNFRSF10CO14798 259 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 NARSO43776 548 aaKnown RBP4.8□□□□□ -1.64
RDH11-208ENST00000556692 ZBTB7AO95365 584 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 L1CAMP32004 1257 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 IL12RB1P42701 662 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 AUHQ13825 339 aaKnown RBP4.8□□□□□ -1.64
RDH11-208ENST00000556692 PRKD1Q15139 912 aaPredicted RBP4.8□□□□□ -1.64
RDH11-208ENST00000556692 LSM12Q3MHD2 195 aaKnown RBP4.8□□□□□ -1.64
RDH11-208ENST00000556692 LDLRAD1Q5T700 205 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 PRAMEF18Q5VWM3 479 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 NLGN2Q8NFZ4 835 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 PTPN18Q99952 460 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 ABCA10Q8WWZ4 1543 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 CLIP1P30622 1438 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 CFAP43Q8NDM7 1665 aa4.8□□□□□ -1.64
RDH11-208ENST00000556692 ABCA5Q8WWZ7 1642 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 EFCAB5A4FU69 1503 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 C9IYK1 514 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 FGF10O15520 208 aaPredicted RBP4.79□□□□□ -1.64
RDH11-208ENST00000556692 TBC1D8O95759 1140 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 SLFN13Q68D06 897 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 KIAA0825Q8IV33 1275 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 SPON2Q9BUD6 331 aa4.79□□□□□ -1.64
RDH11-208ENST00000556692 ABCC10Q5T3U5 1492 aa4.78□□□□□ -1.64
RDH11-208ENST00000556692 FGD5Q6ZNL6 1462 aa4.78□□□□□ -1.64
RDH11-208ENST00000556692 PTH1RQ03431 593 aa4.78□□□□□ -1.64
RDH11-208ENST00000556692 CCDC144CPQ8IYA2 1237 aa4.78□□□□□ -1.64
RDH11-208ENST00000556692 LZTR1Q8N653 840 aa4.78□□□□□ -1.64
RDH11-208ENST00000556692 NETO2Q8NC67 525 aa4.78□□□□□ -1.64
RDH11-208ENST00000556692 SUCOQ9UBS9 1254 aaKnown RBP4.78□□□□□ -1.64
RDH11-208ENST00000556692 SHOXO15266 292 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 B4GALT4O60513 344 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 NOP2P46087 812 aaKnown RBP4.77□□□□□ -1.65
RDH11-208ENST00000556692 USP39Q53GS9 565 aaKnown RBP4.77□□□□□ -1.65
RDH11-208ENST00000556692 PRR31Q5SQ13 230 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 TDRD10Q5VZ19 366 aaKnown RBP4.77□□□□□ -1.65
RDH11-208ENST00000556692 INTS3Q68E01 1043 aaKnown RBP4.77□□□□□ -1.65
RDH11-208ENST00000556692 CD300LDQ6UXZ3 194 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 KBTBD2Q8IY47 623 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 C7orf61Q8IZ16 206 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 FAM9AQ8IZU1 332 aaPredicted RBP4.77□□□□□ -1.65
RDH11-208ENST00000556692 DHRS1Q96LJ7 313 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 PTCHD1Q96NR3 888 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 ADOQ96SZ5 270 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 BACH2Q9BYV9 841 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 BCL11AQ9H165 835 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 PRR13Q9NZ81 148 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 RWDD3Q9Y3V2 267 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 TOPBP1Q92547 1522 aa4.77□□□□□ -1.65
RDH11-208ENST00000556692 AQRO60306 1485 aaKnown RBP eCLIP4.76□□□□□ -1.658e-7■■■■■ 28.7
RDH11-208ENST00000556692 ZNF16P17020 682 aaPredicted RBP4.76□□□□□ -1.65
RDH11-208ENST00000556692 ZNF76P36508 570 aa4.76□□□□□ -1.65
RDH11-208ENST00000556692 ZNF394Q53GI3 561 aa4.76□□□□□ -1.65
RDH11-208ENST00000556692 FBXW10Q5XX13 1052 aa4.76□□□□□ -1.65
RDH11-208ENST00000556692 TMEM168Q9H0V1 697 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms