RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PABPC4Q13310 644 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC01550-206ENST00000556462 TMEM266Q2M3C6 531 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 CEP55Q53EZ4 464 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 SPRYD7Q5W111 196 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 KANK3Q6NY19 840 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 PDXDC2PQ6P474 469 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 CABP7Q86V35 215 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 RIOX2Q8IUF8 465 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 SLFN12Q8IYM2 578 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 GRAMD1CQ8IYS0 662 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 ZFP91Q96JP5 570 aaPredicted RBP12.22□□□□□ -0.45
LINC01550-206ENST00000556462 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 MAF1Q9H063 256 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 ACAD9Q9H845 621 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 TXNRD2Q9NNW7 524 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 A1CFQ9NQ94 594 aaKnown RBP12.22□□□□□ -0.45
LINC01550-206ENST00000556462 CYP39A1Q9NYL5 469 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 MARCH6O60337 910 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 CETPP11597 493 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 OSBPP22059 807 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 GTF2A2P52657 109 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 MRPS9P82933 396 aaKnown RBP12.22□□□□□ -0.45
LINC01550-206ENST00000556462 SPIRE1Q08AE8 756 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
LINC01550-206ENST00000556462 POSTNQ15063 836 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 BRI3BPQ8WY22 251 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 RMDN3Q96TC7 470 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 MTRQ99707 1265 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 PYM1Q9BRP8 204 aaKnown RBP12.22□□□□□ -0.45
LINC01550-206ENST00000556462 RAB34Q9BZG1 259 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
LINC01550-206ENST00000556462 ZBTB48P10074 688 aaPredicted RBP12.21□□□□□ -0.45
LINC01550-206ENST00000556462 ITGB5P18084 799 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 SARSP49591 514 aaKnown RBP12.21□□□□□ -0.45
LINC01550-206ENST00000556462 Q3C1V9 767 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 CEP57L1Q8IYX8 460 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 SPATA20Q8TB22 786 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 MXRA8Q9BRK3 442 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 PDCD2LQ9BRP1 358 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 PAGR1Q9BTK6 254 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 PXMP2Q9NR77 195 aa12.21□□□□□ -0.45
LINC01550-206ENST00000556462 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.46
LINC01550-206ENST00000556462 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 BTBD19C9JJ37 291 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 ARP10275 920 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 EIF2AK2P19525 551 aaKnown RBP12.2□□□□□ -0.46
LINC01550-206ENST00000556462 HUNKP57058 714 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PGM5Q15124 567 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 CCL15Q16663 113 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
LINC01550-206ENST00000556462 NT5DC1Q5TFE4 455 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PLA2G4DQ86XP0 818 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PLIN2Q99541 437 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 MOV10L1Q9BXT6 1211 aaKnown RBP12.2□□□□□ -0.46
LINC01550-206ENST00000556462 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 CCDC39Q9UFE4 941 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 HOOK1Q9UJC3 728 aaKnown RBP12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 CYP2C8P10632 490 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PLCG1P19174 1290 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 STAT6P42226 847 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 AFMP43652 599 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 GRB10Q13322 594 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 STAMQ92783 540 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PNMA5Q96PV4 448 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 UBIAD1Q9Y5Z9 338 aa12.2□□□□□ -0.46
LINC01550-206ENST00000556462 PDHXO00330 501 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 BIN1O00499 593 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 PSMD10O75832 226 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 BCRP11274 1271 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 CASP1P29466 404 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 DPYDQ12882 1025 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
LINC01550-206ENST00000556462 ECM1Q16610 540 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 STX1AQ16623 288 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 ARHGEF16Q5VV41 709 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 KRT79Q5XKE5 535 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 NIPA1Q7RTP0 329 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 SLC5A5Q92911 643 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 PTPN18Q99952 460 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
LINC01550-206ENST00000556462 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms