RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ABRAQ8N0Z2 381 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
ATXN3-236ENST00000556220 SHCBP1Q8NEM2 672 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 FEZ1Q99689 392 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 SPATC1LQ9H0A9 340 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 KIAA1683Q9H0B3 1180 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 NKX2-4Q9H2Z4 354 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 SLC28A3Q9HAS3 691 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 C11orf16Q9NQ32 467 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 HOXC10Q9NYD6 342 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 HMG20BQ9P0W2 317 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 PRRC2BQ5JSZ5 2229 aaKnown RBP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 KRBA1A5PL33 1030 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 GNB5O14775 395 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 ACRP10323 421 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 CSF2RAP15509 400 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 COL8A1P27658 744 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 LAMC2Q13753 1193 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 COG2Q14746 738 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 TEAD4Q15561 434 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 TATDN1Q6P1N9 297 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 PSRC1Q6PGN9 363 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 ATF7IPQ6VMQ6 1270 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 TRIM50Q86XT4 487 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 TMEM199Q8N511 208 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 SPATA5Q8NB90 893 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 ACER1Q8TDN7 264 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 NUP133Q8WUM0 1156 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 MAML3Q96JK9 1138 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 RPAP3Q9H6T3 665 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 COPRSQ9NQ92 184 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 STARD7Q9NQZ5 370 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 AATFQ9NY61 560 aaKnown RBP eCLIP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 HCN2Q9UL51 889 aa8.4□□□□□ -1.06
ATXN3-236ENST00000556220 PA2G4Q9UQ80 394 aaKnown RBP8.4□□□□□ -1.06
ATXN3-236ENST00000556220 PTPRCP08575 1304 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 FLT1P17948 1338 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 A0A1B0GUL7 405 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 PI4K2BG5E9Z4 385 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 ADAMTS4O75173 837 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 HLA-DOAP06340 250 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 CD33P20138 364 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 NOS2P35228 1153 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 CDK7P50613 346 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 ACLYP53396 1101 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 EPHA4P54764 986 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 RAB3GAP1Q15042 981 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 MICALL1Q8N3F8 863 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 KLHDC9Q8NEP7 349 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 MROH8Q9H579 483 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 COG5Q9UP83 839 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
ATXN3-236ENST00000556220 YBX2Q9Y2T7 364 aaKnown RBP8.39□□□□□ -1.07
ATXN3-236ENST00000556220 GPC6Q9Y625 555 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-236ENST00000556220 FRMPD3Q5JV73 1810 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 ELP1O95163 1332 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 ZNF521Q96K83 1311 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 SMCHD1A6NHR9 2005 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 FAM86C2PA6NEL3 165 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 EFSO43281 561 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 ZNF865P0CJ78 1059 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 TAL1P17542 331 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 DGKGP49619 791 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 MRE11P49959 708 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 KCNA10Q16322 511 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 ZNF468Q5VIY5 522 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 NAA16Q6N069 864 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 PLEKHM2Q8IWE5 1019 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 MB21D1Q8N884 522 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 IL23AQ9NPF7 189 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 MARK1Q9P0L2 795 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 SAP30BPQ9UHR5 308 aaKnown RBP8.38□□□□□ -1.07
ATXN3-236ENST00000556220 KLF15Q9UIH9 416 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 PRR12Q9ULL5 1215 aa8.38□□□□□ -1.07
ATXN3-236ENST00000556220 MYH13Q9UKX3 1938 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 MROH7Q68CQ1 1323 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 ADAM23O75077 832 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 FGBP02675 491 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 UBTFL1P0CB47 393 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-236ENST00000556220 FCER1AP12319 257 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 AKR1A1P14550 325 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-236ENST00000556220 TXLNAP40222 546 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 ATP1A2P50993 1020 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 TFCP2Q12800 502 aa8.37□□□□□ -1.07
ATXN3-236ENST00000556220 CERKLQ49MI3 558 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-236ENST00000556220 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms