RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 DDR1Q08345 913 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 KCNA1Q09470 495 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 IKZF1Q13422 519 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 HSP90AB4PQ58FF6 505 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 ZC3H12AQ5D1E8 599 aaKnown RBP7.73□□□□□ -1.17
LINC00643-203ENST00000555518 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 DEFB132Q7Z7B7 95 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 PDZD3Q86UT5 571 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 KIF1BPQ96EK5 621 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 DMRTB1Q96MA1 342 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 PUS3Q9BZE2 481 aaKnown RBP7.73□□□□□ -1.17
LINC00643-203ENST00000555518 GREM2Q9H772 168 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 IL1RAPL2Q9NP60 686 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 LMCD1Q9NZU5 365 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 STAP2Q9UGK3 403 aa7.73□□□□□ -1.17
LINC00643-203ENST00000555518 CARMIL3Q8ND23 1372 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 ZNF609O15014 1411 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 EYA2O00167 538 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 POLRMTO00411 1230 aaKnown RBP7.72□□□□□ -1.17
LINC00643-203ENST00000555518 CIAO1O76071 339 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 HMGB2P26583 209 aaKnown RBP7.72□□□□□ -1.17
LINC00643-203ENST00000555518 ARHGAP4P98171 946 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 ZP2Q05996 745 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 GRM2Q14416 872 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 SF3B3Q15393 1217 aaKnown RBP7.72□□□□□ -1.17
LINC00643-203ENST00000555518 SLC15A2Q16348 729 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 LRRC24Q50LG9 513 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 ERC1Q8IUD2 1116 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 EAF2Q96CJ1 260 aaPredicted RBP7.72□□□□□ -1.17
LINC00643-203ENST00000555518 SETDB2Q96T68 719 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 SIL1Q9H173 461 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 TFCP2L1Q9NZI6 479 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 U3KQE9 123 aa7.72□□□□□ -1.17
LINC00643-203ENST00000555518 ANKRD31Q8N7Z5 1873 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 ARNTP27540 789 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 PDE1AP54750 535 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 TFCP2Q12800 502 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 G3BP1Q13283 466 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00643-203ENST00000555518 MLANAQ16655 118 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 BMP2KLQ5H9B9 411 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 TTC22Q5TAA0 569 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 TSHZ3Q63HK5 1081 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 PRR5LQ6MZQ0 368 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 NBPF5PQ86XG9 351 aaPredicted RBP7.71□□□□□ -1.18
LINC00643-203ENST00000555518 SIAH1Q8IUQ4 282 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 SULF2Q8IWU5 870 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 VGLL2Q8N8G2 317 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
LINC00643-203ENST00000555518 BACH2Q9BYV9 841 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 NYXQ9GZU5 481 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 RIPOR2Q9Y4F9 1068 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 AOX1Q06278 1338 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 A0A1B0GUL6 1792 aa7.71□□□□□ -1.18
LINC00643-203ENST00000555518 TAF1P21675 1872 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 MX1P20591 662 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 IL15P40933 162 aaPredicted RBP7.7□□□□□ -1.18
LINC00643-203ENST00000555518 IFIT5Q13325 482 aaKnown RBP7.7□□□□□ -1.18
LINC00643-203ENST00000555518 ECM1Q16610 540 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 CCDC57Q2TAC2 916 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 TNNI3KQ59H18 835 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 CCDC120Q96HB5 630 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 HEXIM2Q96MH2 286 aaKnown RBP7.7□□□□□ -1.18
LINC00643-203ENST00000555518 CSRNP1Q96S65 589 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 KRTAP4-2Q9BYR5 136 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 GPR108Q9NPR9 543 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 CTNND2Q9UQB3 1225 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 FPGT-TNNI3KV9GXZ4 949 aa7.7□□□□□ -1.18
LINC00643-203ENST00000555518 SPEF2Q9C093 1822 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 ANKRD18BA2A2Z9 1011 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 KLRG2A4D1S0 409 aaPredicted RBP7.69□□□□□ -1.18
LINC00643-203ENST00000555518 ZNF503-AS2A6NEH8 195 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 PATL2C9JE40 543 aaKnown RBP7.69□□□□□ -1.18
LINC00643-203ENST00000555518 SERPINB2P05120 415 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 GLI1P08151 1106 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 NME2P22392 152 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 OS9Q13438 667 aaPredicted RBP7.69□□□□□ -1.18
LINC00643-203ENST00000555518 CRY2Q49AN0 593 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 CCDC152Q4G0S7 254 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 AACSQ86V21 672 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 SPACA3Q8IXA5 215 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 CLASRPQ8N2M8 674 aaKnown RBP7.69□□□□□ -1.18
LINC00643-203ENST00000555518 NIF3L1Q9GZT8 377 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 STK32BQ9NY57 414 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC00643-203ENST00000555518 DBNLQ9UJU6 430 aaKnown RBP7.69□□□□□ -1.18
LINC00643-203ENST00000555518 SAMM50Q9Y512 469 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 ARAP2Q8WZ64 1704 aa7.69□□□□□ -1.18
LINC00643-203ENST00000555518 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
LINC00643-203ENST00000555518 SDSP20132 328 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 FGFR2P21802 821 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 FCGRTP55899 365 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 SCARA3Q6AZY7 606 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 FAM214BQ7L5A3 538 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 NLGN1Q8N2Q7 840 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 CNBD1Q8NA66 436 aa7.68□□□□□ -1.18
LINC00643-203ENST00000555518 CELF1Q92879 486 aaKnown RBP7.68□□□□□ -1.18
LINC00643-203ENST00000555518 PDGFDQ9GZP0 370 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms