RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 ELMOD1Q8N336 334 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 URGCPQ8TCY9 931 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 ZNF577Q9BSK1 485 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 MROH7-TTC4A0A0A0MT08 1334 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 SPATA31A5Q5VU36 1347 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 SPATA31A7Q8IWB4 1347 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 CD19P15391 556 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 SPATS2Q86XZ4 545 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 IGSF22Q8N9C0 903 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 TTLL11Q8NHH1 800 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 STAG1Q8WVM7 1258 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 EAF2Q96CJ1 260 aaPredicted RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 MAP3K20Q9NYL2 800 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 E9PCH4 1651 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 STAM2O75886 525 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 RNF8O76064 485 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 ANXA13P27216 316 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 CRKP46108 304 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 TGFB2P61812 414 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 TTLL4Q14679 1199 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 IFT20Q8IY31 132 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 CACNA2D3Q8IZS8 1091 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 SYNE4Q8N205 404 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 AGBL3Q8NEM8 1001 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 NT5C1BQ96P26 610 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 HACL1Q9UJ83 578 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 PPRC1Q5VV67 1664 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 CREB3O43889 395 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 ZNF202O95125 648 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 ATP11AP98196 1134 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 PTK2Q05397 1052 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 KLHL30Q0D2K2 578 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 NSUN6Q8TEA1 469 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 DTNBP1Q96EV8 351 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 C16orf45Q96MC5 204 aaPredicted RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 NAPGQ99747 312 aaPredicted RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 RAB20Q9NX57 234 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 NUB1Q9Y5A7 615 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 KIF1AQ12756 1690 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 PRR16Q569H4 304 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 CCDC122Q5T0U0 273 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 TRIM50Q86XT4 487 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
LINC00641-201ENST00000555379 PANK4Q9NVE7 773 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 PNPLA7Q6ZV29 1317 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 PHKA2P46019 1235 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 HHIPL2Q6UWX4 724 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 THEM5Q8N1Q8 247 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 TMEM106CQ9BVX2 250 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 LRRC7Q96NW7 1537 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 ECE2O60344 883 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 ALDH1A1P00352 501 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 PSMC2P35998 433 aaKnown RBP9.19□□□□□ -0.94
LINC00641-201ENST00000555379 PHKA1P46020 1223 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 C8orf34Q49A92 452 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 FYB2Q5VWT5 728 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 METTL13Q8N6R0 699 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 NELFBQ8WX92 580 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
LINC00641-201ENST00000555379 FAM227BQ96M60 508 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 FAM210AQ96ND0 272 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 DNAJC25Q9H1X3 360 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
LINC00641-201ENST00000555379 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L10C9JJH3 530 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 CAPN9O14815 690 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 POLR2DO15514 142 aaKnown RBP9.19□□□□□ -0.94
LINC00641-201ENST00000555379 SASH1O94885 1247 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 FGAP02671 866 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 TRIM58Q8NG06 486 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 SNX25Q9H3E2 840 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 CTTNBP2NLQ9P2B4 639 aa9.19□□□□□ -0.94
LINC00641-201ENST00000555379 NKX1-1Q15270 411 aaPredicted RBP9.18□□□□□ -0.94
LINC00641-201ENST00000555379 TADA2BQ86TJ2 420 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 VCX3BQ9H321 246 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 ZSWIM4Q9H7M6 989 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 VCX3AQ9NNX9 186 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 VPS18Q9P253 973 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 RNF14Q9UBS8 474 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 WWC3Q9ULE0 1092 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 ORC4O43929 436 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 CRCPO75575 148 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 HSPA8P11142 646 aaKnown RBP9.18□□□□□ -0.94
LINC00641-201ENST00000555379 HARSP12081 509 aaKnown RBP9.18□□□□□ -0.94
LINC00641-201ENST00000555379 ELF1P32519 619 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 PCK1P35558 622 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 PLCB4Q15147 1175 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 ARHGAP24Q8N264 748 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 OSBPL5Q9H0X9 879 aaPredicted RBP9.18□□□□□ -0.94
LINC00641-201ENST00000555379 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
LINC00641-201ENST00000555379 MRPL47Q9HD33 250 aaKnown RBP9.18□□□□□ -0.94
LINC00641-201ENST00000555379 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms