RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 ARHGEF16Q5VV41 709 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 KRT40Q6A162 431 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 IQCA1Q86XH1 822 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 VWCEQ96DN2 955 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 KAT14Q9H8E8 782 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 LMCD1Q9NZU5 365 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
TMEM253-204ENST00000554844 ABHD14A-ACY1A0A1B0GW23 586 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 FOXP2O15409 715 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 ARIH2O95376 493 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 NT5C2P49902 561 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 IKBKEQ14164 716 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
TMEM253-204ENST00000554844 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
TMEM253-204ENST00000554844 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
TMEM253-204ENST00000554844 IWS1Q96ST2 819 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 RAD9AQ99638 391 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 MTUS1Q9ULD2 1270 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
TMEM253-204ENST00000554844 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 TRANK1O15050 2925 aa11.29□□□□□ -0.6
TMEM253-204ENST00000554844 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
TMEM253-204ENST00000554844 GOLGA8HP0CJ92 632 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
TMEM253-204ENST00000554844 PSEN2P49810 448 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 ASPRV1Q53RT3 343 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 DHX37Q8IY37 1157 aaKnown RBP11.28□□□□□ -0.6
TMEM253-204ENST00000554844 FAM227BQ96M60 508 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 RMDN3Q96TC7 470 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 UBA5Q9GZZ9 404 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 GTF2IRD1Q9UHL9 959 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 ARIH1Q9Y4X5 557 aaPredicted RBP11.28□□□□□ -0.6
TMEM253-204ENST00000554844 MRVI1Q9Y6F6 885 aa11.28□□□□□ -0.6
TMEM253-204ENST00000554844 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
TMEM253-204ENST00000554844 A0A0D9SFI3 127 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
TMEM253-204ENST00000554844 ZNF213O14771 459 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 ARHGEF15O94989 841 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 GJB5O95377 273 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 AMHP03971 560 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 CKBP12277 381 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
TMEM253-204ENST00000554844 DEFB103AP81534 67 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 PTK7Q13308 1070 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 MFSD10Q14728 455 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 FBXO11Q86XK2 927 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 DGKHQ86XP1 1220 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
TMEM253-204ENST00000554844 RILPL2Q969X0 211 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 TAAR1Q96RJ0 339 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 EPHX3Q9H6B9 360 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 HDAC6Q9UBN7 1215 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
TMEM253-204ENST00000554844 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 EMSYQ7Z589 1322 aa11.27□□□□□ -0.61
TMEM253-204ENST00000554844 TET1Q8NFU7 2136 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 LCHNA4D1U4 455 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
TMEM253-204ENST00000554844 CFBP00751 764 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 CXCL10P02778 98 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
TMEM253-204ENST00000554844 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
TMEM253-204ENST00000554844 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMEM253-204ENST00000554844 PDE1AP54750 535 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 ERVK-21P61565 698 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 RBL2Q08999 1139 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
TMEM253-204ENST00000554844 PTPROQ16827 1216 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 KIAA0753Q2KHM9 967 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 PPTC7Q8NI37 304 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
TMEM253-204ENST00000554844 INSL6Q9Y581 213 aa11.26□□□□□ -0.61
TMEM253-204ENST00000554844 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 LPXNO60711 386 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 NBNO60934 754 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 LGR5O75473 907 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 ZNF286BP0CG31 522 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 TRAF1Q13077 416 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms