RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ZYXQ15942 572 aaKnown RBP13.12□□□□□ -0.31
XRCC3-208ENST00000554811 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 GPBP1Q86WP2 473 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
XRCC3-208ENST00000554811 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 GOPCQ9HD26 462 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 PCDHA12Q9UN75 941 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 SRGNP10124 158 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 KLHL30Q0D2K2 578 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 VWA3BQ502W6 1294 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 SPICE1Q8N0Z3 855 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 KIAA0895Q8NCT3 520 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 BCAS4Q8TDM0 211 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
XRCC3-208ENST00000554811 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 NFU1Q9UMS0 254 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 MYH10P35580 1976 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 VAV2P52735 878 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 SF3B3Q15393 1217 aaKnown RBP13.12□□□□□ -0.31
XRCC3-208ENST00000554811 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 NUP58Q9BVL2 599 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 EPB41L5Q9HCM4 733 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 ITIH6Q6UXX5 1313 aa13.12□□□□□ -0.31
XRCC3-208ENST00000554811 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 POTECB2RU33 542 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 BACH1O14867 736 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 CLIC2O15247 247 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 CEP104O60308 925 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 AKR1B1P15121 316 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 PRR16Q569H4 304 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 ZNF526Q8TF50 670 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-208ENST00000554811 TMX4Q9H1E5 349 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-208ENST00000554811 MYH7P12883 1935 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 MYH6P13533 1939 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 KCNK3O14649 394 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 KLRC4O43908 158 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 IVLP07476 585 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 ACTN1P12814 892 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 PDCLQ13371 301 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 TRAPPC11Q7Z392 1133 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 TRIM58Q8NG06 486 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 ARHGAP20Q9P2F6 1191 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 PDS5AQ29RF7 1337 aaKnown RBP13.11□□□□□ -0.31
XRCC3-208ENST00000554811 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
XRCC3-208ENST00000554811 ABCB4P21439 1286 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 MCM3P25205 808 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-208ENST00000554811 AMIGO3Q86WK7 504 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
XRCC3-208ENST00000554811 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 AP1M1Q9BXS5 423 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 MYO1AQ9UBC5 1043 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
XRCC3-208ENST00000554811 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 KRT14P02533 472 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 GPSM2P81274 684 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 SLC9C1Q4G0N8 1177 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 CFAP58Q5T655 872 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 KIAA0825Q8IV33 1275 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 FEZ2Q9UHY8 353 aaPredicted RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 C4orf32Q8N8J7 132 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 UHMK1Q8TAS1 419 aaKnown RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 OSBPL9Q96SU4 736 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 CCDC113Q9H0I3 377 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 PALMO75781 387 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 HEXIM1O94992 359 aaKnown RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 POTEEQ6S8J3 1075 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 RBM12Q9NTZ6 932 aaKnown RBP13.1□□□□□ -0.31
XRCC3-208ENST00000554811 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
XRCC3-208ENST00000554811 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 NDUFAB1O14561 156 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 MAP2K7O14733 419 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 ADAM9Q13443 819 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 TUBB2AQ13885 445 aa13.09□□□□□ -0.31
XRCC3-208ENST00000554811 MAN2A1Q16706 1144 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms