RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NT5C1BQ96P26 610 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 IVNS1ABPQ9Y6Y0 642 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 MFAP3LO75121 409 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 DLATP10515 647 aaKnown RBP15.18■□□□□ 0.02
VTI1B-204ENST00000554659 NNTQ13423 1086 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 CCDC127Q96BQ5 260 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 AMNQ9BXJ7 453 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 ZNF804BA4D1E1 1349 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 MOCS3O95396 460 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 SERPING1P05155 500 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 ARHGAP4P98171 946 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 TRIM50Q86XT4 487 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 PUS7LQ9H0K6 701 aaKnown RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 SLFNL1Q499Z3 407 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 ACTR5Q9H9F9 607 aaPredicted RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 EIF4A3P38919 411 aaKnown RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 IFNAR2P48551 515 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 YARSP54577 528 aaKnown RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 CYP4A11Q02928 519 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 PDZD4Q76G19 769 aaPredicted RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 FAM186BQ8IYM0 893 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 GLG1Q92896 1179 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 SUDS3Q9H7L9 328 aaPredicted RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 USP6P35125 1406 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 MYO5CQ9NQX4 1742 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 RNF8O76064 485 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 SERPINB6P35237 376 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 RESP18Q5W5W9 173 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 ANKRD35Q8N283 1001 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 RASGRP4Q8TDF6 673 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 MORC4Q8TE76 937 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 PRPF31Q8WWY3 499 aaKnown RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 BPIFA3Q9BQP9 254 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 ABCB6Q9NP58 842 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
VTI1B-204ENST00000554659 PTPN22Q9Y2R2 807 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
VTI1B-204ENST00000554659 SASH1O94885 1247 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 TCP11X2Q5H9J9 407 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 PPP1R2P3Q6NXS1 205 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 SCYL2Q6P3W7 929 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 ARHGEF18Q6ZSZ5 1173 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 FAM81BQ96LP2 452 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 PCDHB6Q9Y5E3 794 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 ECEL1O95672 775 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 EMBQ6PCB8 327 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 SPATS2LQ9NUQ6 558 aaKnown RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 PABPC4Q13310 644 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■■□□ 16
VTI1B-204ENST00000554659 SLMAPQ14BN4 828 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 EIF3BP55884 814 aaKnown RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 DHX9Q08211 1270 aaKnown RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 GRM1Q13255 1194 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 TBCKQ8TEA7 893 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 AS3MTQ9HBK9 375 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 CTNND1O60716 968 aaKnown RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 ALAS1P13196 640 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 LTKP29376 864 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 NT5C2P49902 561 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 PLTPP55058 493 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 RINT1Q6NUQ1 792 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 CDKL2Q92772 493 aa15.16■□□□□ 0.02
VTI1B-204ENST00000554659 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
VTI1B-204ENST00000554659 ZFYVE16Q7Z3T8 1539 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 GARSP41250 739 aaKnown RBP15.15■□□□□ 0.02
VTI1B-204ENST00000554659 KIF11P52732 1056 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 HSPA2P54652 639 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 CLEC17AQ6ZS10 378 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 MB21D1Q8N884 522 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 PDZD8Q8NEN9 1154 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 ZSWIM5Q9P217 1185 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 TMEM232C9JQI7 657 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 FTCDO95954 541 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 KRT31Q15323 416 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 E2F5Q15329 346 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 LRRC41Q15345 812 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 TRIM42Q8IWZ5 723 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 ZNF653Q96CK0 615 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 THRAP3Q9Y2W1 955 aaKnown RBP15.15■□□□□ 0.02
VTI1B-204ENST00000554659 INHBAP08476 426 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 NR1D1P20393 614 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 PIK3CAP42336 1068 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 TERF2Q15554 542 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 KAZNQ674X7 775 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 LCORLQ8N3X6 602 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 HMGB1P1B2RPK0 211 aaPredicted RBP15.15■□□□□ 0.02
VTI1B-204ENST00000554659 POC1B-GALNT4F8VUJ3 575 aa15.15■□□□□ 0.02
VTI1B-204ENST00000554659 TMEM191BP0C7N4 346 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms