RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CLIP3Q96DZ5 547 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 NACADO15069 1562 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 SEC24DO94855 1032 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 FASTKD5Q7L8L6 764 aaKnown RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 IFNKQ9P0W0 207 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 EVI5O60447 810 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 SETSIPP0DME0 302 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 LONP1P36776 959 aaKnown RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 MRPL12P52815 198 aaKnown RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 RARSP54136 660 aaKnown RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 RBBP7Q16576 425 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 INTS1Q8N201 2190 aaKnown RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 RHPN1Q8TCX5 695 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 DESI2Q9BSY9 194 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 RASSF4Q9H2L5 321 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 CCSER2Q9H7U1 834 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 MSH6P52701 1360 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 MCM5P33992 734 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 GCC1Q96CN9 775 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 RIMS2Q9UQ26 1411 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 RAP1GDS1P52306 607 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 GSDMDP57764 484 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 CLMNQ96JQ2 1002 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 TRIM10Q9UDY6 481 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 AKAP5P24588 427 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 DDX39BQ13838 428 aaKnown RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 STX1AQ16623 288 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 DEFB119Q8N690 84 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 EPYCQ99645 322 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 FAM118BQ9BPY3 351 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 TSPYL2Q9H2G4 693 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-212ENST00000554584 FBXL21Q9UKT6 434 aa3.59□□□□□ -1.83
SYNE2-212ENST00000554584 SPATA31D3P0C874 917 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 ZAP70P43403 619 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 SPATA31D4Q6ZUB0 917 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 SMYD4Q8IYR2 804 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 EFHBQ8N7U6 833 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 ATP11CQ8NB49 1132 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 TBC1D2Q9BYX2 928 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 KANSL2Q9H9L4 492 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 LIG4P49917 911 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 EPS8Q12929 822 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 TTC39BQ5VTQ0 682 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 RNF219Q5W0B1 726 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 CTAGE6Q86UF2 777 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 SLC25A41Q8N5S1 370 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 AGR3Q8TD06 166 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 KIAA1468Q9P260 1216 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 U3KPZ7 1027 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 RRN3P2A6NIE6 340 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 CTAGE5O15320 804 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 SRSF11Q05519 484 aaKnown RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 EIF4A2Q14240 407 aaKnown RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 NOLC1Q14978 699 aaKnown RBP eCLIP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 FSCBQ5H9T9 825 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 ALG13Q9NP73 1137 aaKnown RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 SEPT4O43236 478 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 GPC4O75487 556 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 SKILP12757 684 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 DEUP1Q05D60 604 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 MAP7Q14244 749 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 ZSCAN23Q3MJ62 389 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 OR6B2Q6IFH4 312 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 HEATR4Q86WZ0 1026 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 TOP1MTQ969P6 601 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 TDRD3Q9H7E2 651 aaKnown RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 AFF2P51816 1311 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 PEX10O60683 326 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 ABL2P42684 1182 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 GTSE1Q9NYZ3 720 aa3.59□□□□□ -1.84
SYNE2-212ENST00000554584 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.59□□□□□ -1.84
SYNE2-212ENST00000554584 ITGB6P18564 788 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 METTL23Q86XA0 190 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 SLC44A2Q8IWA5 706 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-212ENST00000554584 PTPRHQ9HD43 1115 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 NDFIP2Q9NV92 336 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 NEMFO60524 1076 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 TACC1O75410 805 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 ANP32DO95626 131 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 RBBP4Q09028 425 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 SLMAPQ14BN4 828 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 NCOA7Q8NI08 942 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM63Q969Q1 353 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 NLRP4Q96MN2 994 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 RBSNQ9H1K0 784 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 KRT10P13645 584 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 SMARCA1P28370 1054 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 KLHL24Q6TFL4 600 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 ZGPATQ8N5A5 531 aaKnown RBP3.58□□□□□ -1.84
SYNE2-212ENST00000554584 ENOX1Q8TC92 643 aaKnown RBP3.58□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF287Q9HBT7 754 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC88CQ9P219 2028 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 FOSP01100 380 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-212ENST00000554584 EPB41P11171 864 aaKnown RBP3.58□□□□□ -1.84
SYNE2-212ENST00000554584 UBASH3AP57075 661 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 SPDYE7PQ495Y7 208 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 NETO2Q8NC67 525 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 PPFIBP2Q8ND30 876 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 TTC17Q96AE7 1141 aa3.58□□□□□ -1.84
SYNE2-212ENST00000554584 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms