RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SLC52A2Q9HAB3 445 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 PPARGC1AQ9UBK2 798 aaKnown RBP7.46□□□□□ -1.22
SCFD1-211ENST00000554437 SFMBT1Q9UHJ3 866 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 NUDT5Q9UKK9 219 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
SCFD1-211ENST00000554437 TBX22Q9Y458 520 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 X6R8D5 127 aa7.46□□□□□ -1.22
SCFD1-211ENST00000554437 TLDC2A0PJX2 215 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 PLD2O14939 933 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 PPP1R12AO14974 1030 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-211ENST00000554437 EFCAB14O75071 495 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 RAPGEF3O95398 923 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 APPP05067 770 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 OLFML2BQ68BL8 750 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 TMEM132EQ6IEE7 984 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 Q8N1Y9 231 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 FBXO15Q8NCQ5 510 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-211ENST00000554437 SLC7A14Q8TBB6 771 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 JAM3Q9BX67 310 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 SIT1Q9Y3P8 196 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 PCDHA9Q9Y5H5 950 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 PCDHA8Q9Y5H6 950 aa7.45□□□□□ -1.22
SCFD1-211ENST00000554437 CDC45O75419 566 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 CRTAMO95727 393 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 SOD2P04179 222 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 NAT1P18440 290 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 GRK2P25098 689 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 VIPR1P32241 457 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 GRK3P35626 688 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 SRSF3P84103 164 aaKnown RBP7.44□□□□□ -1.22
SCFD1-211ENST00000554437 PLEKHN1Q494U1 663 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-211ENST00000554437 ZC3H14Q6PJT7 736 aaKnown RBP7.44□□□□□ -1.22
SCFD1-211ENST00000554437 TMC6Q7Z403 805 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
SCFD1-211ENST00000554437 RIOX2Q8IUF8 465 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 PEX11GQ96HA9 241 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 KCNJ15Q99712 375 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 AP5M1Q9H0R1 490 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 SIRT5Q9NXA8 310 aa7.44□□□□□ -1.22
SCFD1-211ENST00000554437 MYOCOSA0A1B0GUC4 107 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-211ENST00000554437 HRKO00198 91 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 PEX10O60683 326 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 DGKIO75912 1065 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 FARP2O94887 1054 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-211ENST00000554437 PRR5P85299 388 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 PAK1Q13153 545 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 TCEA2Q15560 299 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 TRIM61Q5EBN2 209 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 GSTCDQ8NEC7 633 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 MAGEB10Q96LZ2 347 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-211ENST00000554437 MCOLN1Q9GZU1 580 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 CDIP1Q9H305 208 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 EPB41L1Q9H4G0 881 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 HCFC2Q9Y5Z7 792 aa7.43□□□□□ -1.22
SCFD1-211ENST00000554437 FAM47E-STBD1D6RA91 191 aa7.42□□□□□ -1.22
SCFD1-211ENST00000554437 FNDC3BQ53EP0 1204 aaKnown RBP7.42□□□□□ -1.22
SCFD1-211ENST00000554437 OGFOD2Q6N063 350 aa7.42□□□□□ -1.22
SCFD1-211ENST00000554437 BRAPQ7Z569 592 aa7.42□□□□□ -1.22
SCFD1-211ENST00000554437 SYNPOQ8N3V7 929 aa7.42□□□□□ -1.22
SCFD1-211ENST00000554437 KRTAP4-11Q9BYQ6 195 aa7.42□□□□□ -1.22
SCFD1-211ENST00000554437 KCNQ2O43526 872 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 RASGRP1O95267 797 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 SLC6A11P48066 632 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 SDE2Q6IQ49 451 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 ZC3H7AQ8IWR0 971 aaKnown RBP7.41□□□□□ -1.22
SCFD1-211ENST00000554437 NLGN1Q8N2Q7 840 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 SEC14L1Q92503 715 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 KCNN1Q92952 543 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 FAM84AQ96KN4 292 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 CLUHP3Q96NS8 147 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 CD2APQ9Y5K6 639 aa7.41□□□□□ -1.22
SCFD1-211ENST00000554437 TEX51A0A1B0GUA7 166 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 ARVCFO00192 962 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 ENPP3O14638 875 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SGSM2O43147 1006 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 ZBTB7AO95365 584 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SRGAP2CP0DJJ0 459 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 GNAT1P11488 350 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 JAG1P78504 1218 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 ZNF200P98182 395 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SPIRE1Q08AE8 756 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SLC9A5Q14940 896 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 CHRNA2Q15822 529 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 C21orf62-AS1Q17RA5 79 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 ZNF648Q5T619 568 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-211ENST00000554437 STEAP3Q658P3 488 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-211ENST00000554437 FGD2Q7Z6J4 655 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SCLYQ96I15 445 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SLC38A3Q99624 504 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 SGPP1Q9BX95 441 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 BCAS3Q9H6U6 928 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms