RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SEPT14Q6ZU15 432 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 CHST3Q7LGC8 479 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 IQCA1Q86XH1 822 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 UBA5Q9GZZ9 404 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 CPVLQ9H3G5 476 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 KAT14Q9H8E8 782 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 NEDD4P46934 1319 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 ARIH2O95376 493 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 IQCF3P0C7M6 154 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 COL9A1P20849 921 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 EDNRBP24530 442 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 DEKP35659 375 aaKnown RBP10.31□□□□□ -0.76
TDP1-208ENST00000553989 PTPN11Q06124 597 aaPredicted RBP10.31□□□□□ -0.76
TDP1-208ENST00000553989 PTGISQ16647 500 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 AAK1Q2M2I8 961 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 PNMA1Q8ND90 353 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 ARNTL2Q8WYA1 636 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 ABCB11O95342 1321 aa10.31□□□□□ -0.76
TDP1-208ENST00000553989 TTC28Q96AY4 2481 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 A6NJR5 290 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 RFXAPO00287 272 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 KDM4AO75164 1064 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 GH1P01241 217 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 MMP3P08254 477 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 HDAC1Q13547 482 aaPredicted RBP10.3□□□□□ -0.76
TDP1-208ENST00000553989 STXBP2Q15833 593 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 LY6KQ17RY6 165 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 CCDC178Q5BJE1 867 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 ARHGEF16Q5VV41 709 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 CWC27Q6UX04 472 aaKnown RBP10.3□□□□□ -0.76
TDP1-208ENST00000553989 DGKHQ86XP1 1220 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 PHOSPHO2Q8TCD6 241 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 NSUN6Q8TEA1 469 aaKnown RBP10.3□□□□□ -0.76
TDP1-208ENST00000553989 AFG1LQ8WV93 481 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 VAT1LQ9HCJ6 419 aa10.3□□□□□ -0.76
TDP1-208ENST00000553989 SCN5AQ14524 2016 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 SCN10AQ9Y5Y9 1956 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 B4E1Z4 1266 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 TLL1O43897 1013 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 BAIAP3O94812 1187 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 PARP1P09874 1014 aaKnown RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 EIF2AK2P19525 551 aaKnown RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 SDSP20132 328 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 CASTP20810 708 aaKnown RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 TFF2Q03403 129 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 ASPRV1Q53RT3 343 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 HERC6Q8IVU3 1022 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 ADGRF4Q8IZF3 695 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 C7orf31Q8N865 590 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 RGS22Q8NE09 1264 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 VWCEQ96DN2 955 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 NECAB3Q96P71 396 aaPredicted RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 TAAR1Q96RJ0 339 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 RMDN3Q96TC7 470 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 UBAC1Q9BSL1 405 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 ALG1Q9BT22 464 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 RWDD1Q9H446 243 aaPredicted RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 MRPL11Q9Y3B7 192 aaKnown RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 MRVI1Q9Y6F6 885 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 TANC1Q9C0D5 1861 aa10.29□□□□□ -0.76
TDP1-208ENST00000553989 SPTBN5Q9NRC6 3674 aaKnown RBP10.29□□□□□ -0.76
TDP1-208ENST00000553989 CFBP00751 764 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 SELPP16109 830 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 NT5C2P49902 561 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 KCNQ1P51787 676 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 DGKDQ16760 1214 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
TDP1-208ENST00000553989 QRICH1Q2TAL8 776 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
TDP1-208ENST00000553989 LRRC8DQ7L1W4 858 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 FBXO11Q86XK2 927 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 SYTL5Q8TDW5 730 aaPredicted RBP10.28□□□□□ -0.76
TDP1-208ENST00000553989 AFAP1L1Q8TED9 768 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 TBC1D5Q92609 795 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 IWS1Q96ST2 819 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 ZSCAN10Q96SZ4 725 aaPredicted RBP10.28□□□□□ -0.76
TDP1-208ENST00000553989 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 MTCH2Q9Y6C9 303 aa10.28□□□□□ -0.76
TDP1-208ENST00000553989 EPOPA6NHQ4 379 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 HIP1O00291 1037 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
TDP1-208ENST00000553989 MAP3K13O43283 966 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 SORBS3O60504 671 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 ZNF286BP0CG31 522 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 MYCLP12524 364 aaPredicted RBP10.27□□□□□ -0.77
TDP1-208ENST00000553989 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
TDP1-208ENST00000553989 TAP1Q03518 808 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 ARHGAP1Q07960 439 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 IFIT1BQ5T764 474 aaKnown RBP10.27□□□□□ -0.77
TDP1-208ENST00000553989 KRT40Q6A162 431 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 CCDC62Q6P9F0 684 aa10.27□□□□□ -0.77
TDP1-208ENST00000553989 DHX37Q8IY37 1157 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms