RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CEP55Q53EZ4 464 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 SLFN12Q8IYM2 578 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 LINC00301Q8NCQ3 95 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-210ENST00000553950 MBOAT7Q96N66 472 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 TAAR1Q96RJ0 339 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 NUDT12Q9BQG2 462 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 RAB34Q9BZG1 259 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 CNPY2Q9Y2B0 182 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 PCDHB6Q9Y5E3 794 aa16.45■□□□□ 0.22
SHMT2-210ENST00000553950 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 TRPA1O75762 1119 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 NR3C2P08235 984 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 EDNRBP24530 442 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 PDE4DQ08499 809 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 IRF5Q13568 498 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 STXBP2Q15833 593 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 CALCRLQ16602 461 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 TMEM266Q2M3C6 531 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 DPP9Q86TI2 863 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 GPRASP2Q96D09 838 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 ERO1AQ96HE7 468 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 APBA2Q99767 749 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 TCEAL9Q9UHQ7 104 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 RCOR1Q9UKL0 485 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 LOXHD1Q8IVV2 1947 aa16.44■□□□□ 0.22
SHMT2-210ENST00000553950 ZSWIM8A7E2V4 1837 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 MAFGO15525 162 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 MARCH6O60337 910 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 TDP2O95551 362 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 HOXC6P09630 235 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 HOXD10P28358 340 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
SHMT2-210ENST00000553950 PTPAQ15257 358 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 ZNF174Q15697 407 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 MORN1Q5T089 497 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 TRMT44Q8IYL2 757 aaKnown RBP16.43■□□□□ 0.22
SHMT2-210ENST00000553950 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
SHMT2-210ENST00000553950 FAM20AQ96MK3 541 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 MXRA8Q9BRK3 442 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 TFIP11Q9UBB9 837 aaKnown RBP16.43■□□□□ 0.22
SHMT2-210ENST00000553950 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
SHMT2-210ENST00000553950 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
SHMT2-210ENST00000553950 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 PGK2P07205 417 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 MYCLP12524 364 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-210ENST00000553950 ME1P48163 572 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 CNTN2Q02246 1040 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 PTGDRQ13258 359 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 MTMR1Q13613 665 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 NBR1Q14596 966 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 ZNF792Q3KQV3 632 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 PRR16Q569H4 304 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 KCNV1Q6PIU1 500 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 VSIG10LQ86VR7 867 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 INPP4AQ96PE3 977 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-210ENST00000553950 FTOQ9C0B1 505 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHMT2-210ENST00000553950 JADE2Q9NQC1 790 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 UBIAD1Q9Y5Z9 338 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
SHMT2-210ENST00000553950 IGLV3-22A0A075B6J6 115 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 SOWAHBA6NEL2 793 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 GPR25O00155 361 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 CUTAO60888 179 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 FKTNO75072 461 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 PSMC4P43686 418 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 PRMT2P55345 433 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 UBXN2AP68543 259 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 MAMDC4Q6UXC1 1216 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 AK8Q96MA6 479 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 KCNMB3Q9NPA1 279 aa16.41■□□□□ 0.22
SHMT2-210ENST00000553950 FAM86B1E9PN63 330 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 MEIS1O00470 390 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 SLC37A4O43826 429 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 FAM86B2P0C5J1 330 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 XRCC5P13010 732 aaKnown RBP16.4■□□□□ 0.22
SHMT2-210ENST00000553950 MCM4P33991 863 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 LONP1P36776 959 aaKnown RBP16.4■□□□□ 0.22
SHMT2-210ENST00000553950 TXLNAP40222 546 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 UBE2HP62256 183 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 OLFML2BQ68BL8 750 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 ZNF579Q8NAF0 562 aaKnown RBP16.4■□□□□ 0.22
SHMT2-210ENST00000553950 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-210ENST00000553950 IL31RAQ8NI17 732 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
SHMT2-210ENST00000553950 SRPRBQ9Y5M8 271 aaKnown RBP16.4■□□□□ 0.22
SHMT2-210ENST00000553950 A0A1W2PQ27 194 aa16.39■□□□□ 0.21
SHMT2-210ENST00000553950 A0A1W2PQ64 194 aa16.39■□□□□ 0.21
SHMT2-210ENST00000553950 A0A1W2PQD8 194 aa16.39■□□□□ 0.21
SHMT2-210ENST00000553950 COBLO75128 1261 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms