RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 LZTR1Q8N653 840 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 NOX5Q96PH1 765 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 CLEC1BQ9P126 229 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 RWDD3Q9Y3V2 267 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 C1QTNF3-AMACRE9PGA6 284 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 SUSD5O60279 629 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 NPHS1O60500 1241 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 PLS3P13797 630 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 EEPD1Q7L9B9 569 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 COPS5Q92905 334 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 GPRC5CQ9NQ84 441 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 CYP26B1Q9NR63 512 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 GULP1Q9UBP9 304 aa5.1□□□□□ -1.59
LINC00648-201ENST00000553747 C7orf72A4D263 438 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 AGRPO00253 132 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 THBDP07204 575 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 ASGR2P07307 311 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 GDF5P43026 501 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 NAALADL2Q58DX5 795 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 MICAL1Q8TDZ2 1067 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 SH3RF3Q8TEJ3 882 aaPredicted RBP5.09□□□□□ -1.59
LINC00648-201ENST00000553747 MRGPRX3Q96LB0 322 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 GMLQ99445 158 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 LGR4Q9BXB1 951 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 NKX2-4Q9H2Z4 354 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 ST6GALNAC2Q9UJ37 374 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 NUDT5Q9UKK9 219 aa5.09□□□□□ -1.59
LINC00648-201ENST00000553747 GJB6O95452 261 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 ITGAVP06756 1048 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 SNRPB2P08579 225 aaKnown RBP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 GLI4P10075 376 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 NCAM1P13591 858 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 TACR2P21452 398 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 HOXC12P31275 282 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 SARSP49591 514 aaKnown RBP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 TBC1D10BQ4KMP7 808 aaPredicted RBP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 CRB2Q5IJ48 1285 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 IQCEQ6IPM2 695 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 ANKS3Q6ZW76 656 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 ZNF227Q86WZ6 799 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 ZNF761Q86XN6 746 aaPredicted RBP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 NETO2Q8NC67 525 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 CHST13Q8NET6 341 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 BTN2A2Q8WVV5 523 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 HNRNPLLQ8WVV9 542 aaKnown RBP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 ALG3Q92685 438 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 PEX11GQ96HA9 241 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 C8orf37Q96NL8 207 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 SAMD11Q96NU1 681 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 MMP19Q99542 508 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 C1QTNF3Q9BXJ4 246 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 ST7Q9NRC1 585 aa5.08□□□□□ -1.6
LINC00648-201ENST00000553747 SPATA6Q9NWH7 488 aaPredicted RBP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00648-201ENST00000553747 PPP1R11O60927 126 aaPredicted RBP5.07□□□□□ -1.6
LINC00648-201ENST00000553747 FUCA1P04066 466 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 ECI1P42126 302 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 KCNJ6P48051 423 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 MRM1Q6IN84 353 aaKnown RBP5.07□□□□□ -1.6
LINC00648-201ENST00000553747 CCDC140Q96MF4 163 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 MTA3Q9BTC8 594 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 EPN3Q9H201 632 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 BTG4Q9NY30 223 aa5.07□□□□□ -1.6
LINC00648-201ENST00000553747 TBX1O43435 398 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 CPP00450 1065 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 PLATP00750 562 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 PMLP29590 882 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 SMAD4Q13485 552 aaKnown RBP5.06□□□□□ -1.6
LINC00648-201ENST00000553747 SLC9A5Q14940 896 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 E4F1Q66K89 784 aaPredicted RBP5.06□□□□□ -1.6
LINC00648-201ENST00000553747 MBLAC2Q68D91 279 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 WWC2Q6AWC2 1192 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 B3GNT8Q7Z7M8 397 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 SMARCC2Q8TAQ2 1214 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 FRS2Q8WU20 508 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 RNF38Q9H0F5 515 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 MARCH2Q9P0N8 246 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 FBLN5Q9UBX5 448 aa5.06□□□□□ -1.6
LINC00648-201ENST00000553747 MEFVO15553 781 aaPredicted RBP5.05□□□□□ -1.6
LINC00648-201ENST00000553747 MYO1BO43795 1136 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 ZBTB7AO95365 584 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 NTRK1P04629 796 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 ACVRL1P37023 503 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 RPL11P62913 178 aaKnown RBP5.05□□□□□ -1.6
LINC00648-201ENST00000553747 KCNAB2Q13303 367 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 DDR2Q16832 855 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 SLC10A6Q3KNW5 377 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 LIMS2Q7Z4I7 341 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 TTC9BQ8N6N2 239 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 CELF2-AS1Q8N7Q2 184 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 NPLOC4Q8TAT6 608 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 DIO2Q92813 273 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 ZBTB8AQ96BR9 441 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 TSPAN17Q96FV3 270 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 SLITRK6Q9H5Y7 841 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 NTMQ9P121 344 aa5.05□□□□□ -1.6
LINC00648-201ENST00000553747 PPP1R1BQ9UD71 204 aaPredicted RBP5.05□□□□□ -1.6
LINC00648-201ENST00000553747 TIMM13Q9Y5L4 95 aaPredicted RBP5.05□□□□□ -1.6
LINC00648-201ENST00000553747 C22orf46C9J442 243 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 STK10O94804 968 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms