RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TBC1D32Q96NH3 1257 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 BACH2Q9BYV9 841 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 VPS54Q9P1Q0 977 aa26.18■■□□□ 1.78
TDP1-206ENST00000553569 DEXIO95424 95 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 TXNP10599 105 aaKnown RBP26.17■■□□□ 1.78
TDP1-206ENST00000553569 BEX3Q00994 111 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 VSIG10LQ86VR7 867 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 KLHDC9Q8NEP7 349 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 COPS5Q92905 334 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 FERMT2Q96AC1 680 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 PGBD1Q96JS3 809 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 PCDHA6Q9UN73 950 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 PCDHA8Q9Y5H6 950 aa26.17■■□□□ 1.78
TDP1-206ENST00000553569 CCDC148Q8NFR7 591 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 OR6J1Q8NGC5 347 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 DPF3Q92784 378 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 GLT8D2Q9H1C3 349 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 TMEM260Q9NX78 707 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 LIMCH1Q9UPQ0 1083 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 MRVI1Q9Y6F6 885 aa26.16■■□□□ 1.78
TDP1-206ENST00000553569 ESYT2A0FGR8 921 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 CTDNEP1O95476 244 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 CST5P28325 142 aaPredicted RBP26.15■■□□□ 1.78
TDP1-206ENST00000553569 ATN1P54259 1190 aaPredicted RBP26.15■■□□□ 1.78
TDP1-206ENST00000553569 KCNA10Q16322 511 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 GNASQ5JWF2 1037 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 AIFM3Q96NN9 605 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 ZMYND12Q9H0C1 365 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 EHMT1Q9H9B1 1298 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 C6orf50Q9HD87 102 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 PHF24Q9UPV7 400 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 Q9Y3F1 56 aa26.15■■□□□ 1.78
TDP1-206ENST00000553569 NKRFO15226 690 aaKnown RBP eCLIP26.14■■□□□ 1.78
TDP1-206ENST00000553569 CTAGE5O15320 804 aa26.14■■□□□ 1.78
TDP1-206ENST00000553569 MRPS9P82933 396 aaKnown RBP26.14■■□□□ 1.78
TDP1-206ENST00000553569 FSCN1Q16658 493 aaKnown RBP26.14■■□□□ 1.78
TDP1-206ENST00000553569 LY6KQ17RY6 165 aa26.14■■□□□ 1.78
TDP1-206ENST00000553569 PCNX4Q63HM2 1172 aa26.14■■□□□ 1.78
TDP1-206ENST00000553569 ANO3Q9BYT9 981 aa26.14■■□□□ 1.78
TDP1-206ENST00000553569 RTEL1Q9NZ71 1219 aa26.14■■□□□ 1.78
TDP1-206ENST00000553569 STK36Q9NRP7 1315 aa26.14■■□□□ 1.77
TDP1-206ENST00000553569 RGS20O76081 388 aa26.13■■□□□ 1.77
TDP1-206ENST00000553569 ACLYP53396 1101 aa26.13■■□□□ 1.77
TDP1-206ENST00000553569 JAKMIP3Q5VZ66 844 aa26.13■■□□□ 1.77
TDP1-206ENST00000553569 CCSAPQ6IQ19 270 aaPredicted RBP26.13■■□□□ 1.77
TDP1-206ENST00000553569 CCDC62Q6P9F0 684 aa26.13■■□□□ 1.77
TDP1-206ENST00000553569 PCSK9Q8NBP7 692 aaKnown RBP26.13■■□□□ 1.77
TDP1-206ENST00000553569 TSEN34Q9BSV6 310 aaKnown RBP26.13■■□□□ 1.77
TDP1-206ENST00000553569 PDE4DIPQ5VU43 2346 aa26.13■■□□□ 1.77
TDP1-206ENST00000553569 A0A1W2PQ45 241 aaPredicted RBP26.12■■□□□ 1.77
TDP1-206ENST00000553569 A0A1W2PQY0 241 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 ADAMTS3O15072 1205 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 GNA11P29992 359 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 CLK2P49760 499 aaKnown RBP26.12■■□□□ 1.77
TDP1-206ENST00000553569 NLRP5P59047 1200 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 ST3GAL1Q11201 340 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 LRRC26Q2I0M4 334 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 TEX2Q8IWB9 1127 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 SH3GLB2Q9NR46 395 aa26.12■■□□□ 1.77
TDP1-206ENST00000553569 ORC3Q9UBD5 711 aaPredicted RBP26.12■■□□□ 1.77
TDP1-206ENST00000553569 MOXD2PA6NHM9 499 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 ST18O60284 1047 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 STAM2O75886 525 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 FOSP01100 380 aaPredicted RBP26.11■■□□□ 1.77
TDP1-206ENST00000553569 ASGR1P07306 291 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 NKX3-2P78367 333 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 AP3B2Q13367 1082 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 GNPTABQ3T906 1256 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 XRRA1Q6P2D8 792 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 CCDC83Q8IWF9 413 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 REXO1Q8N1G1 1221 aaKnown RBP26.11■■□□□ 1.77
TDP1-206ENST00000553569 NSUN7Q8NE18 718 aaKnown RBP26.11■■□□□ 1.77
TDP1-206ENST00000553569 RASGRP4Q8TDF6 673 aa26.11■■□□□ 1.77
TDP1-206ENST00000553569 DDX41Q9UJV9 622 aaKnown RBP26.11■■□□□ 1.77
TDP1-206ENST00000553569 TNRC18O15417 2968 aaPredicted RBP26.11■■□□□ 1.77
TDP1-206ENST00000553569 ZEB2O60315 1214 aa26.1■■□□□ 1.77
TDP1-206ENST00000553569 SORBS3O60504 671 aa26.1■■□□□ 1.77
TDP1-206ENST00000553569 GH1P01241 217 aa26.1■■□□□ 1.77
TDP1-206ENST00000553569 BICD2Q8TD16 824 aa26.1■■□□□ 1.77
TDP1-206ENST00000553569 INPP4AQ96PE3 977 aaPredicted RBP26.1■■□□□ 1.77
TDP1-206ENST00000553569 MYH7BA7E2Y1 1941 aa26.1■■□□□ 1.77
TDP1-206ENST00000553569 EVI5O60447 810 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 JAK2O60674 1132 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 CPT1AP50416 773 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 ARHGAP1Q07960 439 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 KCNV1Q6PIU1 500 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 C7orf61Q8IZ16 206 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 ZSCAN31Q96LW9 406 aaPredicted RBP26.09■■□□□ 1.77
TDP1-206ENST00000553569 STARD7Q9NQZ5 370 aa26.09■■□□□ 1.77
TDP1-206ENST00000553569 UBA1P22314 1058 aaKnown RBP26.08■■□□□ 1.77
TDP1-206ENST00000553569 CXCL17Q6UXB2 119 aa26.08■■□□□ 1.77
TDP1-206ENST00000553569 SLC39A5Q6ZMH5 540 aa26.08■■□□□ 1.77
TDP1-206ENST00000553569 VTI1AQ96AJ9 217 aa26.08■■□□□ 1.77
TDP1-206ENST00000553569 GLT1D1Q96MS3 346 aa26.08■■□□□ 1.77
TDP1-206ENST00000553569 SH2B1Q9NRF2 756 aaPredicted RBP26.08■■□□□ 1.77
TDP1-206ENST00000553569 DOCK5Q9H7D0 1870 aa26.08■■□□□ 1.77
TDP1-206ENST00000553569 FIBPO43427 364 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 MYL3P08590 195 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 RTP1P59025 263 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 SEMA3FQ13275 785 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms