RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SPRED2Q7Z698 418 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 TBC1D10CQ8IV04 446 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 GDPD5Q8WTR4 605 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 COPS5Q92905 334 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 DSCC1Q9BVC3 393 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 IL25Q9H293 177 aa13.84□□□□□ -0.19
SRP54-203ENST00000553544 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
SRP54-203ENST00000553544 EFCAB14O75071 495 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 GJB5O95377 273 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 SSTR3P32745 418 aaPredicted RBP13.83□□□□□ -0.2
SRP54-203ENST00000553544 RPS6P62753 249 aaKnown RBP13.83□□□□□ -0.2
SRP54-203ENST00000553544 IKBKEQ14164 716 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 GPNMBQ14956 572 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 TMCO2Q7Z6W1 182 aaPredicted RBP13.83□□□□□ -0.2
SRP54-203ENST00000553544 CLEC4DQ8WXI8 215 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 UIMC1Q96RL1 719 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 MTUS1Q9ULD2 1270 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 MYH6P13533 1939 aa13.83□□□□□ -0.2
SRP54-203ENST00000553544 ZNF213O14771 459 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 CXCL10P02778 98 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
SRP54-203ENST00000553544 KCNA5P22460 613 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 EDNRBP24530 442 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 NT5C2P49902 561 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 DEFB103AP81534 67 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 PUS10Q3MIT2 529 aaKnown RBP13.82□□□□□ -0.2
SRP54-203ENST00000553544 RRP12Q5JTH9 1297 aaKnown RBP13.82□□□□□ -0.2
SRP54-203ENST00000553544 GDF6Q6KF10 455 aaPredicted RBP13.82□□□□□ -0.2
SRP54-203ENST00000553544 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 LRRC8DQ7L1W4 858 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 SESTD1Q86VW0 696 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.82□□□□□ -0.2
SRP54-203ENST00000553544 TTC14Q96N46 770 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 TMEM47Q9BQJ4 181 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 RNF41Q9H4P4 317 aaPredicted RBP13.82□□□□□ -0.2
SRP54-203ENST00000553544 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 TOMM22Q9NS69 142 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
SRP54-203ENST00000553544 BRWD1Q9NSI6 2320 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
SRP54-203ENST00000553544 PTCRAQ6ISU1 281 aaPredicted RBP13.81□□□□□ -0.2
SRP54-203ENST00000553544 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 C7orf31Q8N865 590 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 AFG1LQ8WV93 481 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 INSL6Q9Y581 213 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 LCTP09848 1927 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 NEDD4P46934 1319 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
SRP54-203ENST00000553544 SCN5AQ14524 2016 aa13.81□□□□□ -0.2
SRP54-203ENST00000553544 GRXCR2A6NFK2 248 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 NBNO60934 754 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 GH1P01241 217 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 CKBP12277 381 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 DGKDQ16760 1214 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 ESR2Q92731 530 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 CTAGE1Q96RT6 745 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 SCN10AQ9Y5Y9 1956 aa13.8□□□□□ -0.2
SRP54-203ENST00000553544 TET1Q8NFU7 2136 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 ARIH2O95376 493 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
SRP54-203ENST00000553544 MMP3P08254 477 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 CHMLP26374 656 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 RBL2Q08999 1139 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 PTPROQ16827 1216 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 LY6KQ17RY6 165 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 SEPT14Q6ZU15 432 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 CHST3Q7LGC8 479 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 DGKHQ86XP1 1220 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 DHX38Q92620 1227 aaKnown RBP13.79□□□□□ -0.2
SRP54-203ENST00000553544 KAT2BQ92831 832 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 MAF1Q9H063 256 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 HDAC6Q9UBN7 1215 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 GTF2IRD1Q9UHL9 959 aa13.79□□□□□ -0.2
SRP54-203ENST00000553544 LRRC37A2A6NM11 1700 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 PDHBP11177 359 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 IL9P15248 144 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 PTK7Q13308 1070 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 STXBP2Q15833 593 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 IMMTQ16891 758 aaKnown RBP13.78□□□□□ -0.2
SRP54-203ENST00000553544 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
SRP54-203ENST00000553544 ANKS1AQ92625 1134 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 MRPL38Q96DV4 380 aaKnown RBP13.78□□□□□ -0.2
SRP54-203ENST00000553544 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 KCNH6Q9H252 994 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 FAM50BQ9Y247 325 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
SRP54-203ENST00000553544 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
SRP54-203ENST00000553544 DCXO43602 365 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms