RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TESK1Q15569 626 aa10.09□□□□□ -0.79
PCNX1-205ENST00000553508 TARBP2Q15633 366 aaKnown RBP10.09□□□□□ -0.79
PCNX1-205ENST00000553508 SOGA3Q5TF21 947 aa10.09□□□□□ -0.79
PCNX1-205ENST00000553508 COA3Q9Y2R0 106 aaPredicted RBP10.09□□□□□ -0.79
PCNX1-205ENST00000553508 NPFFR2Q9Y5X5 522 aa10.09□□□□□ -0.79
PCNX1-205ENST00000553508 IRS2Q9Y4H2 1338 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
PCNX1-205ENST00000553508 ADCY3O60266 1144 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 ASGR2P07307 311 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 FAM153BP0C7A2 387 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 ZSCAN22P10073 491 aaPredicted RBP10.08□□□□□ -0.8
PCNX1-205ENST00000553508 PMLP29590 882 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 NTRK3Q16288 839 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 CNKSR3Q6P9H4 555 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 DCP2Q8IU60 420 aaKnown RBP10.08□□□□□ -0.8
PCNX1-205ENST00000553508 TSPAN17Q96FV3 270 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 AP5M1Q9H0R1 490 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
PCNX1-205ENST00000553508 PPARGC1AQ9UBK2 798 aaKnown RBP10.08□□□□□ -0.8
PCNX1-205ENST00000553508 FAN1Q9Y2M0 1017 aa10.08□□□□□ -0.8
PCNX1-205ENST00000553508 SGSM2O43147 1006 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 ZBTB7AO95365 584 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 NCAM1P13591 858 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 ATF2P15336 505 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 SLC9A5Q14940 896 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 MROH9Q5TGP6 573 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 FOXB2Q5VYV0 432 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 IPO9Q96P70 1041 aaKnown RBP10.07□□□□□ -0.8
PCNX1-205ENST00000553508 GPR27Q9NS67 375 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 X6R8D5 127 aa10.07□□□□□ -0.8
PCNX1-205ENST00000553508 FBLN1P23142 703 aa10.06□□□□□ -0.8
PCNX1-205ENST00000553508 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
PCNX1-205ENST00000553508 MILR1Q7Z6M3 343 aa10.06□□□□□ -0.8
PCNX1-205ENST00000553508 FAM129CQ86XR2 697 aa10.06□□□□□ -0.8
PCNX1-205ENST00000553508 ZBTB38Q8NAP3 1195 aaPredicted RBP10.06□□□□□ -0.8
PCNX1-205ENST00000553508 JAM3Q9BX67 310 aa10.06□□□□□ -0.8
PCNX1-205ENST00000553508 H7BY64 318 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 VMACQ2NL98 169 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 LCNL1Q6ZST4 164 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 RIOX2Q8IUF8 465 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 SEC14L1Q92503 715 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 DRC1Q96MC2 740 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 PWWP2AQ96N64 755 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 PALD1Q9ULE6 856 aa10.05□□□□□ -0.8
PCNX1-205ENST00000553508 TRBV23-1A0A0A0MS06 115 aa10.04□□□□□ -0.8
PCNX1-205ENST00000553508 IGFBP6P24592 240 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-205ENST00000553508 FOXO4P98177 505 aa10.04□□□□□ -0.8
PCNX1-205ENST00000553508 SCUBE1Q8IWY4 988 aa10.04□□□□□ -0.8
PCNX1-205ENST00000553508 Q8N1Y9 231 aa10.04□□□□□ -0.8
PCNX1-205ENST00000553508 OSBPL2Q9H1P3 480 aa10.04□□□□□ -0.8
PCNX1-205ENST00000553508 TRAF6Q9Y4K3 522 aa10.04□□□□□ -0.8
PCNX1-205ENST00000553508 ADAMTS20P59510 1910 aa10.03□□□□□ -0.8
PCNX1-205ENST00000553508 AFF3P51826 1226 aaKnown RBP10.03□□□□□ -0.8
PCNX1-205ENST00000553508 ASXL2Q76L83 1435 aa10.03□□□□□ -0.8
PCNX1-205ENST00000553508 BMS1Q14692 1282 aaKnown RBP10.02□□□□□ -0.81
PCNX1-205ENST00000553508 TCERG1LQ5VWI1 586 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 RSPO2Q6UXX9 243 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-205ENST00000553508 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 AMIGO3Q86WK7 504 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 IFNL3Q8IZI9 196 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 MKL1Q969V6 931 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 DACT3Q96B18 629 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-205ENST00000553508 EXOC2Q96KP1 924 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 KCNJ15Q99712 375 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 RNF38Q9H0F5 515 aa10.02□□□□□ -0.81
PCNX1-205ENST00000553508 DGKIO75912 1065 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 SLC6A11P48066 632 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 STYK1Q6J9G0 422 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 LBX2Q6XYB7 198 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 SMARCC2Q8TAQ2 1214 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 EPB41L1Q9H4G0 881 aa10.01□□□□□ -0.81
PCNX1-205ENST00000553508 HGSO14964 777 aaPredicted RBP10□□□□□ -0.81
PCNX1-205ENST00000553508 GPR85P60893 370 aa10□□□□□ -0.81
PCNX1-205ENST00000553508 SUMO1P63165 101 aaKnown RBP10□□□□□ -0.81
PCNX1-205ENST00000553508 CACNB2Q08289 660 aaPredicted RBP10□□□□□ -0.81
PCNX1-205ENST00000553508 TMEM151BQ8IW70 566 aa10□□□□□ -0.81
PCNX1-205ENST00000553508 SYT3Q9BQG1 590 aa10□□□□□ -0.81
PCNX1-205ENST00000553508 CDIP1Q9H305 208 aa10□□□□□ -0.81
PCNX1-205ENST00000553508 CDK11AQ9UQ88 783 aaPredicted RBP10□□□□□ -0.81
PCNX1-205ENST00000553508 COL6A2P12110 1019 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 CD300LDQ6UXZ3 194 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 SPOCD1Q6ZMY3 1216 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 ETV3LQ6ZN32 361 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 FAM26EQ8N5C1 309 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.99□□□□□ -0.81
PCNX1-205ENST00000553508 DDX11Q96FC9 970 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 DHRS4Q9BTZ2 278 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 PMF1-BGLAPU3KQ54 211 aa9.99□□□□□ -0.81
PCNX1-205ENST00000553508 ARID1BQ8NFD5 2236 aaPredicted RBP9.98□□□□□ -0.81
PCNX1-205ENST00000553508 PLA2G1BP04054 148 aaKnown RBP9.98□□□□□ -0.81
PCNX1-205ENST00000553508 GRK2P25098 689 aa9.98□□□□□ -0.81
PCNX1-205ENST00000553508 GRK3P35626 688 aa9.98□□□□□ -0.81
PCNX1-205ENST00000553508 CHRNA2Q15822 529 aa9.98□□□□□ -0.81
PCNX1-205ENST00000553508 KIZQ2M2Z5 673 aa9.98□□□□□ -0.81
PCNX1-205ENST00000553508 DPH6Q7L8W6 267 aa9.98□□□□□ -0.81
PCNX1-205ENST00000553508 B3GNT8Q7Z7M8 397 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms