RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 ZP2Q05996 745 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 IKZF1Q13422 519 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 RALBP1Q15311 655 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 AMOTQ4VCS5 1084 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 THAP5Q7Z6K1 395 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 ATG4DQ86TL0 474 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 RBBP8NLQ8NC74 664 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 PIWIL2Q8TC59 973 aaKnown RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 DUSP15Q9H1R2 295 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
ATXN3-220ENST00000553491 PKD1L3Q7Z443 1732 aa6.15□□□□□ -1.42
ATXN3-220ENST00000553491 TAF1LQ8IZX4 1826 aa6.15□□□□□ -1.43
ATXN3-220ENST00000553491 DISP2A7MBM2 1401 aa6.15□□□□□ -1.43
ATXN3-220ENST00000553491 TNS2Q63HR2 1409 aa6.15□□□□□ -1.43
ATXN3-220ENST00000553491 SLC22A31A6NKX4 558 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 WASH4PA8MWX3 477 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 SMAD7O15105 426 aaKnown RBP6.14□□□□□ -1.43
ATXN3-220ENST00000553491 CYP27B1O15528 508 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 ANP32CO43423 234 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 KLF4O43474 513 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 SRFP11831 508 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 IMPDH2P12268 514 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 TXNRD1Q16881 649 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 ANKS3Q6ZW76 656 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 LSRQ86X29 649 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-220ENST00000553491 BAHD1Q8TBE0 780 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-220ENST00000553491 UBE2FQ969M7 185 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 CAMKK2Q96RR4 588 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 CRBNQ96SW2 442 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 TMOD3Q9NYL9 352 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 PRKAG3Q9UGI9 489 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
ATXN3-220ENST00000553491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-220ENST00000553491 NUP188Q5SRE5 1749 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 MEIS3P2A8K0S8 358 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 PLSCR1O15162 318 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 HSP90AB1P08238 724 aaKnown RBP6.13□□□□□ -1.43
ATXN3-220ENST00000553491 PHKG2P15735 406 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 WDR43Q15061 677 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATXN3-220ENST00000553491 GAB4Q2WGN9 574 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 SOGA3Q5TF21 947 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 RUFY4Q6ZNE9 571 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 CKAP2LQ8IYA6 745 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 FLAD1Q8NFF5 587 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 CARS2Q9HA77 564 aaKnown RBP6.13□□□□□ -1.43
ATXN3-220ENST00000553491 STK32BQ9NY57 414 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 KLHL3Q9UH77 587 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 NPC1L1Q9UHC9 1359 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 LY75O60449 1722 aa6.13□□□□□ -1.43
ATXN3-220ENST00000553491 LRRN2O75325 713 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 ESR1P03372 595 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 MTHFSDQ2M296 383 aaKnown RBP6.12□□□□□ -1.43
ATXN3-220ENST00000553491 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 DTWD2Q8NBA8 298 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 OR6P1Q8NGX9 317 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 HNRNPLLQ8WVV9 542 aaKnown RBP6.12□□□□□ -1.43
ATXN3-220ENST00000553491 TMEM40Q8WWA1 233 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 PIGBQ92521 554 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
ATXN3-220ENST00000553491 RREB1Q92766 1687 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 PHACTR3Q96KR7 559 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 EP400Q96L91 3159 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 KREMEN1Q96MU8 473 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 PNNQ9H307 717 aaKnown RBP6.12□□□□□ -1.43
ATXN3-220ENST00000553491 TFCP2L1Q9NZI6 479 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 GMIPQ9P107 970 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 ZSWIM5Q9P217 1185 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 CCNL1Q9UK58 526 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-220ENST00000553491 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 TOGARAM1Q9Y4F4 1720 aa6.12□□□□□ -1.43
ATXN3-220ENST00000553491 TUBGCP6Q96RT7 1819 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
ATXN3-220ENST00000553491 MAPK8IP3Q9UPT6 1336 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 ERVV-2B6SEH9 535 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 RGS13O14921 159 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 UBOX5O94941 541 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 TEFQ10587 303 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 SERINC3Q13530 473 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 RAB33AQ14088 237 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 LRRFIP1Q32MZ4 808 aaKnown RBP6.11□□□□□ -1.43
ATXN3-220ENST00000553491 CDCP2Q5VXM1 449 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 OVOS1Q6IE37 1185 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-220ENST00000553491 ATG4CQ96DT6 458 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 KIF2CQ99661 725 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 ASAP1Q9ULH1 1129 aa6.11□□□□□ -1.43
ATXN3-220ENST00000553491 C5P01031 1676 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 RNMTO43148 476 aaKnown RBP6.1□□□□□ -1.43
ATXN3-220ENST00000553491 SLC39A6Q13433 755 aa6.1□□□□□ -1.43
ATXN3-220ENST00000553491 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms