RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SAMSN1Q9NSI8 373 aaKnown RBP17.22■□□□□ 0.35
ABCD4-218ENST00000553486 GCFC2P16383 781 aaKnown RBP17.21■□□□□ 0.35
ABCD4-218ENST00000553486 TXKP42681 527 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
ABCD4-218ENST00000553486 UBE2SQ16763 222 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 TPD52L1Q16890 204 aaPredicted RBP17.21■□□□□ 0.35
ABCD4-218ENST00000553486 FKBP1CQ5VVH2 108 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.35
ABCD4-218ENST00000553486 RWDD2AQ9UIY3 292 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 PCDHA1Q9Y5I3 950 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 NDUFB10O96000 172 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 PLCG1P19174 1290 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 STX17P56962 302 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 AMPD3Q01432 767 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 PDIA5Q14554 519 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 MCTP2Q6DN12 878 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.21■□□□□ 0.35
ABCD4-218ENST00000553486 SMYD4Q8IYR2 804 aaPredicted RBP17.21■□□□□ 0.35
ABCD4-218ENST00000553486 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 CTAGE1Q96RT6 745 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 ELP3Q9H9T3 547 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 CTNND2Q9UQB3 1225 aa17.21■□□□□ 0.35
ABCD4-218ENST00000553486 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
ABCD4-218ENST00000553486 TDP2O95551 362 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 BMP3P12645 472 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 PLIN2Q99541 437 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 PTPN18Q99952 460 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 GTPBP4Q9BZE4 634 aaKnown RBP17.2■□□□□ 0.34
ABCD4-218ENST00000553486 KCND1Q9NSA2 647 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
ABCD4-218ENST00000553486 TMEM232C9JQI7 657 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
ABCD4-218ENST00000553486 PAK1Q13153 545 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 CRHR2Q13324 411 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 VGLL4Q14135 290 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 CDKAL1Q5VV42 579 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 CCDC112Q8NEF3 446 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 A0A1B0GTH6 734 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 SLC37A4O43826 429 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 EDIL3O43854 480 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 KCNJ6P48051 423 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 STIM1Q13586 685 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
ABCD4-218ENST00000553486 NR1I3Q14994 352 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■□□ 15.6
ABCD4-218ENST00000553486 MS4A4AQ96JQ5 239 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 INTS13Q9NVM9 706 aa17.19■□□□□ 0.34
ABCD4-218ENST00000553486 DDX25Q9UHL0 483 aaKnown RBP17.19■□□□□ 0.34
ABCD4-218ENST00000553486 TBC1D12O60347 775 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 RHOBTB3O94955 611 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 USP11P51784 963 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 JAG1P78504 1218 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 AP3B2Q13367 1082 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 KMT5BQ4FZB7 885 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 SPECC1LQ69YQ0 1117 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 FAM83AQ86UY5 434 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 FBXO11Q86XK2 927 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 NELFBQ8WX92 580 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 CDK5RAP3Q96JB5 506 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 C7orf25Q9BPX7 421 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
ABCD4-218ENST00000553486 STK17AQ9UEE5 414 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 TRIM17Q9Y577 477 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 OTOFQ9HC10 1997 aa17.18■□□□□ 0.34
ABCD4-218ENST00000553486 KLRC4O43908 158 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 MARCH6O60337 910 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 SPAG1Q07617 926 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 TRAF1Q13077 416 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 OTOP1Q7RTM1 612 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-218ENST00000553486 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 CSADQ9Y600 493 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 SLC34A2O95436 690 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 PRCPP42785 496 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 TBX2Q13207 712 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-218ENST00000553486 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 SV2BQ7L1I2 683 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 ADSSL1Q8N142 457 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 ANKRD20A12PQ8NF67 263 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 GDAQ9Y2T3 454 aa17.17■□□□□ 0.34
ABCD4-218ENST00000553486 UQCRHLA0A096LP55 91 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 A0A1W2PRG0 241 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L15C9J2P7 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L13C9JLJ4 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L11C9JVI0 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L18D6R9N7 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L22D6RA61 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L17D6RBQ6 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L19D6RCP7 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 USP17L20D6RJB6 530 aa17.16■□□□□ 0.34
ABCD4-218ENST00000553486 UQCRHP07919 91 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms