RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 FOSP01100 380 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 CLTBP09497 229 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 MYCLP12524 364 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 IFNAR1P17181 557 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 PDIA3P30101 505 aaKnown RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 CDK7P50613 346 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 AKAP17AQ02040 695 aaKnown RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 LAMC2Q13753 1193 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 ANKRD1Q15327 319 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 PFKFB3Q16875 520 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 HABP4Q5JVS0 413 aaKnown RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 PCNX4Q63HM2 1172 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 WWC2Q6AWC2 1192 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 MCTP2Q6DN12 878 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 USP17L6PQ6QN14 398 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 CCDC12Q8WUD4 166 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 EMID1Q96A84 441 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 INPP4AQ96PE3 977 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 LBHD1Q9BQE6 289 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 RNF26Q9BY78 433 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 PDRG1Q9NUG6 133 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 BARHL2Q9NY43 387 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 DDX41Q9UJV9 622 aaKnown RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-204ENST00000553428 MRVI1Q9Y6F6 885 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 LCTP09848 1927 aa9.52□□□□□ -0.89
PCNX1-204ENST00000553428 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 STXBP3O00186 592 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 FIBPO43427 364 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 RGS20O76081 388 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 ARIH2O95376 493 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 SCG2P13521 617 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 SYN1P17600 705 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 ICAM3P32942 547 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 MAGEA10P43363 369 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 ADCY7P51828 1080 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 NAPAP54920 295 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 PURAQ00577 322 aaKnown RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 AP3B2Q13367 1082 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 CPLX2Q6PUV4 134 aaKnown RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 CXCL17Q6UXB2 119 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 NLRX1Q86UT6 975 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 IL31RAQ8NI17 732 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 CDHR1Q96JP9 859 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
PCNX1-204ENST00000553428 RIC8AQ9NPQ8 531 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 PDLIM7Q9NR12 457 aa9.51□□□□□ -0.89
PCNX1-204ENST00000553428 hCG_1642624A0A1W2PR95 340 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 SMCO2A6NFE2 343 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 CPLX1O14810 134 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 KIAA0355O15063 1070 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 MAFGO15525 162 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
PCNX1-204ENST00000553428 MMP3P08254 477 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 MYL3P08590 195 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 HOXD8P13378 290 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-204ENST00000553428 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
PCNX1-204ENST00000553428 PTPN11Q06124 597 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-204ENST00000553428 ARHGAP1Q07960 439 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 NEDD9Q14511 834 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 NTRK3Q16288 839 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 DGKDQ16760 1214 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 CELF3Q5SZQ8 465 aaKnown RBP9.5□□□□□ -0.89
PCNX1-204ENST00000553428 TMEM63BQ5T3F8 832 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 FAM126BQ8IXS8 530 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 DHX37Q8IY37 1157 aaKnown RBP9.5□□□□□ -0.89
PCNX1-204ENST00000553428 TRIM22Q8IYM9 498 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 PPTC7Q8NI37 304 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 COPS5Q92905 334 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 GPRASP2Q96D09 838 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 SENP7Q9BQF6 1050 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 SH3GLB2Q9NR46 395 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 TMEM39AQ9NV64 488 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 MCM3APO60318 1980 aa9.5□□□□□ -0.89
PCNX1-204ENST00000553428 TRIM43BA6NCK2 446 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 SPATA31C2B4DYI2 1134 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 PPFIA4O75335 1185 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 CDKL5O76039 1030 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 CD4P01730 458 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 SUPT20HL2P0C7V6 817 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 UBA1P22314 1058 aaKnown RBP9.49□□□□□ -0.89
PCNX1-204ENST00000553428 GNA11P29992 359 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 FAAP100Q0VG06 881 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 PKN1Q16512 942 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 MYSM1Q5VVJ2 828 aa9.49□□□□□ -0.89
PCNX1-204ENST00000553428 TYW1BQ6NUM6 668 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms