RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 A0A0U1RQG5 324 aaPredicted RBP11.77□□□□□ -0.53
LINC00517-201ENST00000553396 MYL3P08590 195 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 CLTBP09497 229 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 PSMA5P28066 241 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 CDC27P30260 824 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 METAP2P50579 478 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00517-201ENST00000553396 PSMC6P62333 389 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 NKX3-2P78367 333 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 LY6KQ17RY6 165 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 SMARCC2Q8TAQ2 1214 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 CUL5Q93034 780 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 LBHD1Q9BQE6 289 aaPredicted RBP11.77□□□□□ -0.53
LINC00517-201ENST00000553396 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
LINC00517-201ENST00000553396 MAP3K20Q9NYL2 800 aaKnown RBP11.77□□□□□ -0.53
LINC00517-201ENST00000553396 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.53
LINC00517-201ENST00000553396 TRIM43BA6NCK2 446 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 ARVCFO00192 962 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00517-201ENST00000553396 EPB41L2O43491 1005 aaKnown RBP11.76□□□□□ -0.53
LINC00517-201ENST00000553396 SORBS3O60504 671 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
LINC00517-201ENST00000553396 CCND2P30279 289 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 CPT1AP50416 773 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 CCDC62Q6P9F0 684 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 TRIM43Q96BQ3 446 aaPredicted RBP11.76□□□□□ -0.53
LINC00517-201ENST00000553396 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
LINC00517-201ENST00000553396 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
LINC00517-201ENST00000553396 MROH7Q68CQ1 1323 aa11.76□□□□□ -0.53
LINC00517-201ENST00000553396 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 CABYRO75952 493 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 RGS20O76081 388 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 GH1P01241 217 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 ITGB8P26012 769 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
LINC00517-201ENST00000553396 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00517-201ENST00000553396 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 PURAQ00577 322 aaKnown RBP11.75□□□□□ -0.53
LINC00517-201ENST00000553396 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 FAAP100Q0VG06 881 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 FUT2Q10981 343 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 UBE2SQ16763 222 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
LINC00517-201ENST00000553396 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 ANKRD33Q7Z3H0 272 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 FAM126BQ8IXS8 530 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 PPP1R13LQ8WUF5 828 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 BADQ92934 168 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 TOX2Q96NM4 488 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 TMEM39AQ9NV64 488 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
LINC00517-201ENST00000553396 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
LINC00517-201ENST00000553396 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
LINC00517-201ENST00000553396 A6NJR5 290 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 PIK3CDO00329 1044 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 MEIS2O14770 477 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 RAG1P15918 1043 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 BMP8BP34820 402 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 CDK7P50613 346 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 RCAN1P53805 252 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 NAPAP54920 295 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
LINC00517-201ENST00000553396 FAM47CQ5HY64 1035 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 TDHQ8IZJ6 230 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
LINC00517-201ENST00000553396 AGXT2Q9BYV1 514 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
LINC00517-201ENST00000553396 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 KIAA0355O15063 1070 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 TLR3O15455 904 aaKnown RBP11.73□□□□□ -0.53
LINC00517-201ENST00000553396 MMP3P08254 477 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 UBA1P22314 1058 aaKnown RBP11.73□□□□□ -0.53
LINC00517-201ENST00000553396 MRPS9P82933 396 aaKnown RBP11.73□□□□□ -0.53
LINC00517-201ENST00000553396 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
LINC00517-201ENST00000553396 NID2Q14112 1375 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 MTG1Q9BT17 334 aaPredicted RBP11.73□□□□□ -0.53
LINC00517-201ENST00000553396 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
LINC00517-201ENST00000553396 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
LINC00517-201ENST00000553396 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 STXBP3O00186 592 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
LINC00517-201ENST00000553396 B4GALT4O60513 344 aa11.72□□□□□ -0.53
LINC00517-201ENST00000553396 GGPS1O95749 300 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms