RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 KIF4BQ2VIQ3 1234 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 FILIP1LQ4L180 1135 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 HSP90AA4PQ58FG1 418 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 KCTD17Q8N5Z5 321 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 PRPF38AQ8NAV1 312 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 NOC3LQ8WTT2 800 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 LARP4BQ92615 738 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 LPAR1Q92633 364 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 DNAJC19Q96DA6 116 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 ZNF341Q9BYN7 854 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 ZNF536O15090 1300 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 ZNF541Q9H0D2 1346 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
MTHFD1-203ENST00000553391 IGLV3-22A0A075B6J6 115 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 MED24O75448 989 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 ICAM1P05362 532 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 SPATA31C1P0DKV0 1188 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 COPB1P53618 953 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 HIRAP54198 1017 aaPredicted RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 PMS1P54277 932 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 ASIC1P78348 528 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 STIM1Q13586 685 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 KRT31Q15323 416 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 ZYXQ15942 572 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 TPD52L1Q16890 204 aaPredicted RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 PRR16Q569H4 304 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 TCP11X2Q5H9J9 407 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 DCAF15Q66K64 600 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 SPECC1LQ69YQ0 1117 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 ANKRD40Q6AI12 368 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 CENPPQ6IPU0 288 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 FOXR2Q6PJQ5 311 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 CYP2W1Q8TAV3 490 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 CLEC4DQ8WXI8 215 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 P2RX5Q93086 422 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 HOOK2Q96ED9 719 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 SRRTQ9BXP5 876 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 NT5C3AQ9H0P0 336 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 THAP9Q9H5L6 903 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 MAPK8IP1Q9UQF2 711 aa10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 R3HCC1Q9Y3T6 440 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-203ENST00000553391 KCNJ18B7U540 433 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 E9PMD0 336 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 MEIS1O00470 390 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 PSMA7O14818 248 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 CFBP00751 764 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 PLA2G4BP0C869 781 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 FDX1P10109 184 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 FCER1AP12319 257 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 LMNB1P20700 586 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 SFPQP23246 707 aaKnown RBP eCLIP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 RPA1P27694 616 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 ZNF76P36508 570 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 STAT3P40763 770 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 HSD17B4P51659 736 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 USP14P54578 494 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 KCNJ12Q14500 433 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 PTPN21Q16825 1174 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 CATSPER3Q86XQ3 398 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 APOBEC3FQ8IUX4 373 aaKnown RBP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 TMEM139Q8IV31 216 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 SCYL3Q8IZE3 742 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 GPC2Q8N158 579 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 CCAR2Q8N163 923 aaKnown RBP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 TC2NQ8N9U0 490 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 CCDC112Q8NEF3 446 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 ZNF507Q8TCN5 953 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 DDX12PQ92771 950 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 SLF1Q9BQI6 1058 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 POLR3CQ9BUI4 534 aaPredicted RBP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 SLC38A10Q9HBR0 1119 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 EXOC1Q9NV70 894 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 MAP3K20Q9NYL2 800 aaKnown RBP10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 GPRC5DQ9NZD1 345 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 VAV3Q9UKW4 847 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 PNMA2Q9UL42 364 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 KIAA1024Q9UPX6 916 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 KDM3AQ9Y4C1 1321 aa10.49□□□□□ -0.73
MTHFD1-203ENST00000553391 BICDL2A1A5D9 508 aa10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 PSMD10O75832 226 aa10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 EEF1GP26641 437 aaKnown RBP10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 SPP2Q13103 211 aa10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 ARSHQ5FYA8 562 aa10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 ANGEL2Q5VTE6 544 aaKnown RBP10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 E4F1Q66K89 784 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 B3GNT9Q6UX72 402 aa10.48□□□□□ -0.73
MTHFD1-203ENST00000553391 DYMQ7RTS9 669 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms