RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 TBC1D8BQ0IIM8 1120 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 NFX1Q12986 1120 aaKnown RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 HLTFQ14527 1009 aaKnown RBP eCLIP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 CRYMQ14894 314 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 BRDTQ58F21 947 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 PPP4R3AQ6IN85 833 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 CFAP161Q6P656 301 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 CYP26C1Q6V0L0 522 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 IFNL2Q8IZJ0 200 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 SLC7A5P1Q8MH63 180 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 SPATA18Q8TC71 538 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 AFAP1L1Q8TED9 768 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 ZNF483Q8TF39 744 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 RAPGEF4Q8WZA2 1011 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 E2F7Q96AV8 911 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 ZNF594Q96JF6 807 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 C8orf76Q96K31 380 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 PHOX2BQ99453 314 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 CNNM2Q9H8M5 875 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 PLEKHA5Q9HAU0 1116 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 CAPN10Q9HC96 672 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 AIPL1Q9NZN9 384 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 KIAA1468Q9P260 1216 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 BIN2Q9UBW5 565 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 FBXL5Q9UKA1 691 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 PA2G4Q9UQ80 394 aaKnown RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 TTLL3Q9Y4R7 772 aa5.5□□□□□ -1.53
PFDN5-219ENST00000553171 COL11A2P13942 1736 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 COL5A3P25940 1745 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 ZNF646O15015 1829 aaPredicted RBP5.5□□□□□ -1.53
PFDN5-219ENST00000553171 POLR2AP24928 1970 aaKnown RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 SNED1Q8TER0 1413 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 RIF1Q5UIP0 2472 aaKnown RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 GOLGA6L10A6NI86 522 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 DDX11L8A8MPP1 907 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 ADM5C9JUS6 153 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 PI4K2BG5E9Z4 385 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 PDLIM1O00151 329 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TNFRSF10BO14763 440 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 CASQ2O14958 399 aaPredicted RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 OPA1O60313 960 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 SKIP12755 728 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TATP17735 454 aaPredicted RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 CHMLP26374 656 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 GNL1P36915 607 aaPredicted RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 UBA7P41226 1012 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 CCT8P50990 548 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 HDAC4P56524 1084 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 MOGSQ13724 837 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 PUM3Q15397 648 aaKnown RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TSGA10IPQ3SY00 556 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 SPATA1Q5VX52 437 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 PRR5LQ6MZQ0 368 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 PPP1R18Q6NYC8 613 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 C16orf54Q6UWD8 224 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 CATSPER4Q7RTX7 472 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 KIAA0825Q8IV33 1275 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 CPXCR1Q8N123 301 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TXLNBQ8N3L3 684 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 GIMAP7Q8NHV1 300 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TBC1D5Q92609 795 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 MRFAP1L1Q96HT8 127 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TESK2Q96S53 571 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 OSBPL10Q9BXB5 764 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TSGA10Q9BZW7 698 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 DBNDD1Q9H9R9 158 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 ASH1LQ9NR48 2969 aaKnown RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 HOMER3Q9NSC5 361 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 TCP11L1Q9NUJ3 509 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 MTUS1Q9ULD2 1270 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 V9GYY5 206 aaPredicted RBP5.49□□□□□ -1.53
PFDN5-219ENST00000553171 CDH23Q9H251 3354 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 DCHS1Q96JQ0 3298 aa5.49□□□□□ -1.53
PFDN5-219ENST00000553171 SSC5DA1L4H1 1573 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 GOLGA8AA7E2F4 631 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 POM121CA8CG34 1229 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 hCG_1984214I3L0E3 225 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 MYO1CO00159 1063 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 COBLO75128 1261 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 GCFC2P16383 781 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 GRK2P25098 689 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 ADD2P35612 726 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 MAGEA9P43362 315 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PPM1FP49593 454 aaPredicted RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 MXI1P50539 228 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 PEX5P50542 639 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 ARPC4P59998 168 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 AP2B1P63010 937 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 SKOR1P84550 965 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 CXCL9Q07325 125 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 MPP3Q13368 585 aa5.48□□□□□ -1.53
PFDN5-219ENST00000553171 GNL2Q13823 731 aaKnown RBP5.48□□□□□ -1.53
PFDN5-219ENST00000553171 COG2Q14746 738 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms