RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
PFDN5-218ENST00000552742 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
PFDN5-218ENST00000552742 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 C7orf61Q8IZ16 206 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 VTI1AQ96AJ9 217 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 RIC8AQ9NPQ8 531 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 Q9Y3F1 56 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 NR2E3Q9Y5X4 410 aa11.3□□□□□ -0.6
PFDN5-218ENST00000552742 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 CPLX1O14810 134 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 PFKFB2O60825 505 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 ADCY7P51828 1080 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 NKX3-2P78367 333 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 ANKRD1Q15327 319 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 PCSK9Q8NBP7 692 aaKnown RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 OR6J1Q8NGC5 347 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 KIF2CQ99661 725 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 RTEL1Q9NZ71 1219 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
PFDN5-218ENST00000552742 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
PFDN5-218ENST00000552742 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
PFDN5-218ENST00000552742 RTP1P59025 263 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 SP2Q02086 613 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 SCRN1Q12765 414 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 ME3Q16798 604 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
PFDN5-218ENST00000552742 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 CXCL17Q6UXB2 119 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-218ENST00000552742 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 TMEM260Q9NX78 707 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
PFDN5-218ENST00000552742 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-218ENST00000552742 PCDHA6Q9UN73 950 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 MRVI1Q9Y6F6 885 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
PFDN5-218ENST00000552742 SPDYE3A6NKU9 549 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 hCG_1984214I3L0E3 225 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 SORBS3O60504 671 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 LARGE1O95461 756 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 GH1P01241 217 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 MYL3P08590 195 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 SYN1P17600 705 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 TLE2Q04725 743 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 TRIM60Q495X7 471 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 JAKMIP3Q5VZ66 844 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 PCNX4Q63HM2 1172 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 TRIM22Q8IYM9 498 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-218ENST00000552742 AFG1LQ8WV93 481 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 PGBD1Q96JS3 809 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 GLT1D1Q96MS3 346 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 STARD7Q9NQZ5 370 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
PFDN5-218ENST00000552742 A6NJR5 290 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 ZEB2O60315 1214 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 CTDNEP1O95476 244 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-218ENST00000552742 TGFB3P10600 412 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
PFDN5-218ENST00000552742 CPT1AP50416 773 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 CDK7P50613 346 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 PSMC6P62333 389 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 SNX17Q15036 470 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 XRRA1Q6P2D8 792 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 CPLX2Q6PUV4 134 aaKnown RBP11.26□□□□□ -0.61
PFDN5-218ENST00000552742 DHX37Q8IY37 1157 aaKnown RBP11.26□□□□□ -0.61
PFDN5-218ENST00000552742 AIFM3Q96NN9 605 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-218ENST00000552742 ZMYND12Q9H0C1 365 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 GLT8D2Q9H1C3 349 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 GRIN2DO15399 1336 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 ELP1O95163 1332 aa11.26□□□□□ -0.61
PFDN5-218ENST00000552742 ESYT2A0FGR8 921 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 ARVCFO00192 962 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 PQBP1O60828 265 aaKnown RBP11.25□□□□□ -0.61
PFDN5-218ENST00000552742 STAM2O75886 525 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 CABYRO75952 493 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 DEXIO95424 95 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 GGPS1O95749 300 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 ITGB5P18084 799 aa11.25□□□□□ -0.61
PFDN5-218ENST00000552742 ICAM3P32942 547 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms