RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 RBL2Q08999 1139 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 CDC37Q16543 378 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 TMEM31Q5JXX7 168 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 KAT2BQ92831 832 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 KATNAL1Q9BW62 490 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 BRWD1Q9NSI6 2320 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 CCDC171Q6TFL3 1326 aa16.6■□□□□ 0.25
CHMP1A-210ENST00000551981 ABHD14A-ACY1A0A1B0GW23 586 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 LCHNA4D1U4 455 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 GJB5O95377 273 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 CXCL10P02778 98 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 PDE1AP54750 535 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 SYTL5Q8TDW5 730 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 GDPD5Q8WTR4 605 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 CTAGE1Q96RT6 745 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 RAD9AQ99638 391 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 LRFN3Q9BTN0 628 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 UBA5Q9GZZ9 404 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 EPHX3Q9H6B9 360 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 SIP14410 1827 aa16.59■□□□□ 0.25
CHMP1A-210ENST00000551981 CKBP12277 381 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 PSEN2P49810 448 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 DEFB103AP81534 67 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 IKBKEQ14164 716 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 ARHGEF16Q5VV41 709 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 SPRED2Q7Z698 418 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 TMCO2Q7Z6W1 182 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 ZNF589Q86UQ0 364 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 IQCA1Q86XH1 822 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 TBC1D10CQ8IV04 446 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 DHX38Q92620 1227 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 TAAR1Q96RJ0 339 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 CPVLQ9H3G5 476 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 KAT14Q9H8E8 782 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 MRPL11Q9Y3B7 192 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
CHMP1A-210ENST00000551981 MYH7BA7E2Y1 1941 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 NEDD4P46934 1319 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 DHX16O60231 1041 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 NBNO60934 754 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 ERVK-21P61565 698 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 PTK7Q13308 1070 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 LAMC2Q13753 1193 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 GPNMBQ14956 572 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 TBC1D5Q92609 795 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 MRVI1Q9Y6F6 885 aa16.57■□□□□ 0.24
CHMP1A-210ENST00000551981 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 ZNF213O14771 459 aa16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 EIF2AK2P19525 551 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 MFSD10Q14728 455 aa16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 FBXO11Q86XK2 927 aa16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 COL20A1Q9P218 1284 aa16.56■□□□□ 0.24
CHMP1A-210ENST00000551981 EMSYQ7Z589 1322 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 LINC01553A4QN01 128 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 GPR37L1O60883 481 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 F2P00734 622 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 ZNF286BP0CG31 522 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 QRICH1Q2TAL8 776 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 UBE2ZQ9H832 354 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 SUGCTQ9HAC7 445 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 PXMP2Q9NR77 195 aa16.55■□□□□ 0.24
CHMP1A-210ENST00000551981 KDM4AO75164 1064 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 LGR5O75473 907 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 AMHP03971 560 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 NR3C2P08235 984 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 FAM117BQ6P1L5 589 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 KCNV1Q6PIU1 500 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 RILPL2Q969X0 211 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 ZSCAN10Q96SZ4 725 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 INSL6Q9Y581 213 aa16.54■□□□□ 0.24
CHMP1A-210ENST00000551981 HAS3O00219 553 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 PPFIA4O75335 1185 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 CFBP00751 764 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 TCTN1Q2MV58 587 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 TRIM71Q2Q1W2 868 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 FBXO22Q8NEZ5 403 aa16.53■□□□□ 0.24
CHMP1A-210ENST00000551981 ANKS1AQ92625 1134 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms