RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 IFIT2P09913 472 aaKnown RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 TXNP10599 105 aaKnown RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 RLBP1P12271 317 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 CALML3P27482 149 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 RBL2Q08999 1139 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 HYAL1Q12794 435 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 TRIM71Q2Q1W2 868 aaKnown RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 TMEM192Q8IY95 271 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 ATOH1Q92858 354 aaPredicted RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 GMCL1Q96IK5 515 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 HDAC6Q9UBN7 1215 aa17.16■□□□□ 0.34
VPS29-209ENST00000551655 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
VPS29-209ENST00000551655 RGS20O76081 388 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 ZNF200P98182 395 aaPredicted RBP17.15■□□□□ 0.34
VPS29-209ENST00000551655 PDE4BQ07343 736 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 PDE4DQ08499 809 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 CTC1Q2NKJ3 1217 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 ASCL5Q7RTU5 278 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 FBXO11Q86XK2 927 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 CLASRPQ8N2M8 674 aaKnown RBP17.15■□□□□ 0.34
VPS29-209ENST00000551655 FBXL6Q8N531 539 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 DBF4BQ8NFT6 615 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 RALGAPA2Q2PPJ7 1873 aa17.15■□□□□ 0.34
VPS29-209ENST00000551655 H0Y858 1186 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 NKRFO15226 690 aaKnown RBP eCLIP17.14■□□□□ 0.33
VPS29-209ENST00000551655 EFCAB14O75071 495 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 UPP2O95045 317 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 AMHP03971 560 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 MMP3P08254 477 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 ZXDAP98168 799 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 SESTD1Q86VW0 696 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 SCFD2Q8WU76 684 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 PRRX2Q99811 253 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 HAUS7Q99871 368 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 IGFLR1Q9H665 355 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 TLR9Q9NR96 1032 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 GTF2IRD1Q9UHL9 959 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 PTPRZ1P23471 2315 aaPredicted RBP17.14■□□□□ 0.33
VPS29-209ENST00000551655 PLIN4Q96Q06 1357 aa17.14■□□□□ 0.33
VPS29-209ENST00000551655 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
VPS29-209ENST00000551655 ICAM1P05362 532 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 SLC16A2P36021 539 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
VPS29-209ENST00000551655 HIC1Q14526 733 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 TTBK2Q6IQ55 1244 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 NEDD1Q8NHV4 660 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 SAMD11Q96NU1 681 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
VPS29-209ENST00000551655 GRM6O15303 877 aa17.12■□□□□ 0.33
VPS29-209ENST00000551655 ATP5JP18859 108 aa17.12■□□□□ 0.33
VPS29-209ENST00000551655 TFAP4Q01664 338 aa17.12■□□□□ 0.33
VPS29-209ENST00000551655 LY6KQ17RY6 165 aa17.12■□□□□ 0.33
VPS29-209ENST00000551655 RCSD1Q6JBY9 416 aa17.12■□□□□ 0.33
VPS29-209ENST00000551655 CLEC4DQ8WXI8 215 aa17.12■□□□□ 0.33
VPS29-209ENST00000551655 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
VPS29-209ENST00000551655 NMT2O60551 498 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 PLA2G6O60733 806 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 EDNRBP24530 442 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 TDO2P48775 406 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 PTK7Q13308 1070 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 RANBP17Q9H2T7 1088 aaKnown RBP17.11■□□□□ 0.33
VPS29-209ENST00000551655 CD207Q9UJ71 328 aa17.11■□□□□ 0.33
VPS29-209ENST00000551655 ZNF286BP0CG31 522 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 CTNNB1P35222 781 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 PSEN2P49810 448 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
VPS29-209ENST00000551655 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
VPS29-209ENST00000551655 LOC102724159A0A0B4J2E5 919 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 PDGFBP01127 241 aaPredicted RBP17.09■□□□□ 0.33
VPS29-209ENST00000551655 AVPR2P30518 371 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
VPS29-209ENST00000551655 PWP2Q15269 919 aaKnown RBP17.09■□□□□ 0.33
VPS29-209ENST00000551655 PKN1Q16512 942 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 CCDC96Q2M329 555 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 HSP90AB4PQ58FF6 505 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 GIMAP6Q6P9H5 292 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 ASIC4Q96FT7 647 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 RIF1Q5UIP0 2472 aaKnown RBP17.09■□□□□ 0.33
VPS29-209ENST00000551655 WDR87Q6ZQQ6 2873 aa17.09■□□□□ 0.33
VPS29-209ENST00000551655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
VPS29-209ENST00000551655 PRR23AA6NEV1 266 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 LOC730098B7Z3J9 87 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms