RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PCDHA12Q9UN75 941 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 FAM86B1E9PN63 330 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 H7C1D1 291 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 PSMA7O14818 248 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 TBX3O15119 743 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 MARCH6O60337 910 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 CYP3A4P08684 503 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 FAM86B2P0C5J1 330 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 FCER1AP12319 257 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 CCNE1P24864 410 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
RAB5C-208ENST00000551338 PPP1R2P41236 205 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 STK4Q13043 487 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 STIM1Q13586 685 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 TBC1D10BQ4KMP7 808 aaPredicted RBP12.89□□□□□ -0.35
RAB5C-208ENST00000551338 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 P2RX5Q93086 422 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 C16orf45Q96MC5 204 aaPredicted RBP12.89□□□□□ -0.35
RAB5C-208ENST00000551338 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
RAB5C-208ENST00000551338 ZNF341Q9BYN7 854 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
RAB5C-208ENST00000551338 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 FEM1BQ9UK73 627 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 GJA3Q9Y6H8 435 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 LCTP09848 1927 aa12.89□□□□□ -0.35
RAB5C-208ENST00000551338 ABCB11O95342 1321 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 PVALEFA0A1B0GWK0 134 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 POTEB3A0JP26 581 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-208ENST00000551338 POTECB2RU33 542 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 NRDCO43847 1150 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 MED24O75448 989 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 INPP5BP32019 993 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 STAT3P40763 770 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 EHHADHQ08426 723 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 PRR16Q569H4 304 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 TCP11X2Q5H9J9 407 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 POTEBQ6S5H4 581 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 TRIM47Q96LD4 638 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 PRIMPOLQ96LW4 560 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 FEZ1Q99689 392 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
RAB5C-208ENST00000551338 MRPL11Q9Y3B7 192 aaKnown RBP12.88□□□□□ -0.35
RAB5C-208ENST00000551338 ZNF536O15090 1300 aa12.88□□□□□ -0.35
RAB5C-208ENST00000551338 SSC5DA1L4H1 1573 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 IGLV3-22A0A075B6J6 115 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 UQCRHLA0A096LP55 91 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 E9PMD0 336 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
RAB5C-208ENST00000551338 UQCRHP07919 91 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 TNNT1P13805 278 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-208ENST00000551338 DYMQ7RTS9 669 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 LDHDQ86WU2 507 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 MYRIPQ8NFW9 859 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
RAB5C-208ENST00000551338 HPS3Q969F9 1004 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 DNAJC19Q96DA6 116 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
RAB5C-208ENST00000551338 A0A0G2JMZ2 1700 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 GCOM1H8Y6P7 765 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-208ENST00000551338 MSH4O15457 936 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 CTNND1O60716 968 aaKnown RBP12.86□□□□□ -0.35
RAB5C-208ENST00000551338 CFBP00751 764 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 POLR2MP0CAP2 368 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 NBPF12Q5TAG4 269 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-208ENST00000551338 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 DDX12PQ92771 950 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 PPP1R13BQ96KQ4 1090 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 FAM20AQ96MK3 541 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 WDR18Q9BV38 432 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
RAB5C-208ENST00000551338 KIAA1683Q9H0B3 1180 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 VPS16Q9H269 839 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 SLC39A2Q9NP94 309 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 TRMT1Q9NXH9 659 aaKnown RBP12.86□□□□□ -0.35
RAB5C-208ENST00000551338 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
RAB5C-208ENST00000551338 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms