RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
NPAS3-209ENST00000551008 ZFP91Q96JP5 570 aaPredicted RBP15.1■□□□□ 0.01
NPAS3-209ENST00000551008 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
NPAS3-209ENST00000551008 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.1■□□□□ 0.01
NPAS3-209ENST00000551008 NOC4LQ9BVI4 516 aaKnown RBP15.1■□□□□ 0.01
NPAS3-209ENST00000551008 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
NPAS3-209ENST00000551008 POLR3EQ9NVU0 708 aa15.1■□□□□ 0.01
NPAS3-209ENST00000551008 MTMR10Q9NXD2 777 aa15.1■□□□□ 0.01
NPAS3-209ENST00000551008 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
NPAS3-209ENST00000551008 EYSQ5T1H1 3165 aa15.1■□□□□ 0.01
NPAS3-209ENST00000551008 CHD9Q3L8U1 2897 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 ZEB2O60315 1214 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 MMP3P08254 477 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 CSF2RAP15509 400 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 NBPF20Q3BBV1 942 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 RASIP1Q5U651 963 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 FAM109BQ6ICB4 259 aaPredicted RBP15.09■□□□□ 0.01
NPAS3-209ENST00000551008 VSIG10LQ86VR7 867 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 KAT2BQ92831 832 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 MPHOSPH6Q99547 160 aaKnown RBP15.09■□□□□ 0.01
NPAS3-209ENST00000551008 MTG1Q9BT17 334 aaPredicted RBP15.09■□□□□ 0.01
NPAS3-209ENST00000551008 BCAS3Q9H6U6 928 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 TRMT13Q9NUP7 481 aaKnown RBP15.09■□□□□ 0.01
NPAS3-209ENST00000551008 MAP3K20Q9NYL2 800 aaKnown RBP15.09■□□□□ 0.01
NPAS3-209ENST00000551008 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
NPAS3-209ENST00000551008 MYO9BQ13459 2157 aa15.08■□□□□ 0.01
NPAS3-209ENST00000551008 hCG_1642624A0A1W2PR95 340 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 GCOM1H8Y6P7 765 aaPredicted RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 EIF3JO75822 258 aaKnown RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 GH1P01241 217 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 POLR2MP0CAP2 368 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 HOXD8P13378 290 aaPredicted RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 MRPS9P82933 396 aaKnown RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 SP2Q02086 613 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 FUT2Q10981 343 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 SEMA3FQ13275 785 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 APOA5Q6Q788 366 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 TMTC3Q6ZXV5 915 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 SAMD3Q8N6K7 520 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 CTCFLQ8NI51 663 aaPredicted RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 EMID1Q96A84 441 aaPredicted RBP15.08■□□□□ 0
NPAS3-209ENST00000551008 GUCD1Q96NT3 240 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 NEK1Q96PY6 1258 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0
NPAS3-209ENST00000551008 CCDC69A6NI79 296 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 B4DLN1 442 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 MEIS2O14770 477 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 ACRP10323 421 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 CYP2C9P11712 490 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 MYCLP12524 364 aaPredicted RBP15.07■□□□□ 0
NPAS3-209ENST00000551008 CPA1P15085 419 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 MRPL12P52815 198 aaKnown RBP15.07■□□□□ 0
NPAS3-209ENST00000551008 USP17L6PQ6QN14 398 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 FCHSD1Q86WN1 690 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 MICU3Q86XE3 530 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 TMTC2Q8N394 836 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 RNPC3Q96LT9 517 aaKnown RBP15.07■□□□□ 0
NPAS3-209ENST00000551008 HIPK3Q9H422 1215 aa15.07■□□□□ 0
NPAS3-209ENST00000551008 FAM217BQ9NTX9 383 aaPredicted RBP15.07■□□□□ 0
NPAS3-209ENST00000551008 UBA1P22314 1058 aaKnown RBP15.06■□□□□ 0
NPAS3-209ENST00000551008 KIF5BP33176 963 aa15.06■□□□□ 0
NPAS3-209ENST00000551008 SMAD3P84022 425 aaKnown RBP15.06■□□□□ 0
NPAS3-209ENST00000551008 TYW1BQ6NUM6 668 aa15.06■□□□□ 0
NPAS3-209ENST00000551008 FANCBQ8NB91 859 aa15.06■□□□□ 0
NPAS3-209ENST00000551008 RRP36Q96EU6 259 aaKnown RBP15.06■□□□□ 0
NPAS3-209ENST00000551008 SEZ6LQ9BYH1 1024 aa15.06■□□□□ 0
NPAS3-209ENST00000551008 TTYH1Q9H313 450 aaPredicted RBP15.06■□□□□ 0
NPAS3-209ENST00000551008 CHD7Q9P2D1 2997 aa15.06■□□□□ 0
NPAS3-209ENST00000551008 TELO2Q9Y4R8 837 aa15.06■□□□□ 0
NPAS3-209ENST00000551008 PIK3CDO00329 1044 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 KPNA6O60684 536 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 GNAQP50148 359 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 CCL23P55773 120 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 PPIGQ13427 754 aaKnown RBP eCLIP15.05■□□□□ -0
NPAS3-209ENST00000551008 HIC1Q14526 733 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 HSDL1Q3SXM5 330 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 RNF20Q5VTR2 975 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 MYSM1Q5VVJ2 828 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 NFRKBQ6P4R8 1299 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 ZNF365Q70YC5 407 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 DHX32Q7L7V1 743 aaKnown RBP15.05■□□□□ -0
NPAS3-209ENST00000551008 SCLYQ96I15 445 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 INPP4AQ96PE3 977 aaPredicted RBP15.05■□□□□ -0
NPAS3-209ENST00000551008 LZTS2Q9BRK4 669 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 IL23AQ9NPF7 189 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 CXXC1Q9P0U4 656 aaPredicted RBP15.05■□□□□ -0
NPAS3-209ENST00000551008 SNX14Q9Y5W7 946 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 SLC12A7Q9Y666 1083 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 MRVI1Q9Y6F6 885 aa15.05■□□□□ -0
NPAS3-209ENST00000551008 HAS3O00219 553 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 SORBS3O60504 671 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 F2P00734 622 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 ZNF286BP0CG31 522 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 CALM1P0DP23 149 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 CALM2P0DP24 149 aa15.04■□□□□ -0
NPAS3-209ENST00000551008 CALM3P0DP25 149 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms