RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PLCH2O75038 1416 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 WRNQ14191 1432 aaPredicted RBP eCLIP7.07□□□□□ -1.28
CPSF6-206ENST00000550987 A0A0C4DFX4 3053 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 MEFVO15553 781 aaPredicted RBP7.06□□□□□ -1.28
CPSF6-206ENST00000550987 KATNA1O75449 491 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 ITKQ08881 620 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 RNF219Q5W0B1 726 aaPredicted RBP7.06□□□□□ -1.28
CPSF6-206ENST00000550987 STYK1Q6J9G0 422 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 KSR1Q8IVT5 923 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 Q96M66 194 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 TBC1D32Q96NH3 1257 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 MTFR1LQ9H019 292 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 FAN1Q9Y2M0 1017 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 PCDHA8Q9Y5H6 950 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 BACE2Q9Y5Z0 518 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 SCAPERQ9BY12 1400 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 EFCAB6Q5THR3 1501 aa7.06□□□□□ -1.28
CPSF6-206ENST00000550987 ADGRB2O60241 1585 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 EYA4O95677 639 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 THBDP07204 575 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 PYGMP11217 842 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 STAT4Q14765 748 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 OGFOD3Q6PK18 319 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 CRTC3Q6UUV7 619 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 TREML4Q6UXN2 200 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 CLEC10AQ8IUN9 316 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 ZC3H7AQ8IWR0 971 aaKnown RBP7.05□□□□□ -1.28
CPSF6-206ENST00000550987 ARMC10Q8N2F6 343 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 ZNF655Q8N720 491 aaPredicted RBP7.05□□□□□ -1.28
CPSF6-206ENST00000550987 PIWIL2Q8TC59 973 aaKnown RBP7.05□□□□□ -1.28
CPSF6-206ENST00000550987 PI4K2BQ8TCG2 481 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 MTMR8Q96EF0 704 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 PHF20Q9BVI0 1012 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 GPATCH2Q9NW75 528 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 SAMD15Q9P1V8 674 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 ST14Q9Y5Y6 855 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 MSH6P52701 1360 aa7.05□□□□□ -1.28
CPSF6-206ENST00000550987 SETD5Q9C0A6 1442 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 AURKAO14965 403 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 SRGAP2CP0DJJ0 459 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 EPHB1P54762 984 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 TTF1Q15361 905 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 ZCCHC8Q6NZY4 707 aaKnown RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 WDR75Q8IWA0 830 aaKnown RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 DZIP1LQ8IYY4 767 aaKnown RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 MFSD4AQ8N468 514 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 DAGLBQ8NCG7 672 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 SCARF2Q96GP6 870 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 C1orf159Q96HA4 380 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 ZFYVE21Q9BQ24 234 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 ALG1Q9BT22 464 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 TRIT1Q9H3H1 467 aaKnown RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 IFT22Q9H7X7 185 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 ZKSCAN5Q9Y2L8 839 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 THRAP3Q9Y2W1 955 aaKnown RBP7.04□□□□□ -1.28
CPSF6-206ENST00000550987 ADCY9O60503 1353 aa7.04□□□□□ -1.28
CPSF6-206ENST00000550987 MAST1Q9Y2H9 1570 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 RBAK-RBAKDNI3L0D1 243 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 GPR39O43194 453 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 GSTM1P09488 218 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 LTBRP36941 435 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 IL2P60568 153 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 GPR85P60893 370 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 TMPRSS15P98073 1019 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 TNK2Q07912 1038 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 DUSP27Q5VZP5 1158 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 DENND5AQ6IQ26 1287 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 RSPO2Q6UXX9 243 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-206ENST00000550987 NECAB2Q7Z6G3 386 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 KREMEN2Q8NCW0 462 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 FRS2Q8WU20 508 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 DIO2Q92813 273 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 COPS5Q92905 334 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 ZNF775Q96BV0 537 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-206ENST00000550987 TCTN2Q96GX1 697 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 MEGF10Q96KG7 1140 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 FCRL3Q96P31 734 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-206ENST00000550987 SMAD5Q99717 465 aaKnown RBP7.03□□□□□ -1.28
CPSF6-206ENST00000550987 FAM83CQ9BQN1 747 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 CLEC1BQ9P126 229 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 ADAMTS8Q9UP79 889 aa7.03□□□□□ -1.28
CPSF6-206ENST00000550987 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.03□□□□□ -1.28
CPSF6-206ENST00000550987 PRDM15P57071 1507 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-206ENST00000550987 SHISA3A0PJX4 238 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 PRR33A8MZF0 331 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 ZEB2O60315 1214 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 GAS7O60861 476 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 PLS3P13797 630 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 IFNGR1P15260 489 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 VAV1P15498 845 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 CTSKP43235 329 aa7.02□□□□□ -1.29
CPSF6-206ENST00000550987 PCBP3P57721 371 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms