RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
BRF1-218ENST00000550692 ZEB2O60315 1214 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 RGS20O76081 388 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 METAP2P50579 478 aaKnown RBP eCLIP12.96□□□□□ -0.33
BRF1-218ENST00000550692 CDK7P50613 346 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 RCAN1P53805 252 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 LY6KQ17RY6 165 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 SMARCC2Q8TAQ2 1214 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
BRF1-218ENST00000550692 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
BRF1-218ENST00000550692 TOX2Q96NM4 488 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 PRKAG2Q9UGJ0 569 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 DDX41Q9UJV9 622 aaKnown RBP12.96□□□□□ -0.33
BRF1-218ENST00000550692 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.33
BRF1-218ENST00000550692 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.33
BRF1-218ENST00000550692 LAMA3Q16787 3333 aa12.96□□□□□ -0.34
BRF1-218ENST00000550692 GRIN2DO15399 1336 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 A0A0U1RQG5 324 aaPredicted RBP12.95□□□□□ -0.34
BRF1-218ENST00000550692 ARVCFO00192 962 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 PIK3CDO00329 1044 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 CLTBP09497 229 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 BMP8BP34820 402 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 PSMC6P62333 389 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 FAAP100Q0VG06 881 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 HEATR3Q7Z4Q2 680 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 CUL5Q93034 780 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
BRF1-218ENST00000550692 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
BRF1-218ENST00000550692 A6NJR5 290 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 DCDC2CA8MYV0 355 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 CABYRO75952 493 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 MYL3P08590 195 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 ITGB8P26012 769 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 CCND2P30279 289 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 CPT1AP50416 773 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
BRF1-218ENST00000550692 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
BRF1-218ENST00000550692 ARHGAP1Q07960 439 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 TOB2Q14106 344 aaPredicted RBP12.94□□□□□ -0.34
BRF1-218ENST00000550692 SLC43A3Q8NBI5 491 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 KIF2CQ99661 725 aa12.94□□□□□ -0.34
BRF1-218ENST00000550692 LBHD1Q9BQE6 289 aaPredicted RBP12.94□□□□□ -0.34
BRF1-218ENST00000550692 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
BRF1-218ENST00000550692 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 KIAA0355O15063 1070 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 GH1P01241 217 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 PDIA3P30101 505 aaKnown RBP12.93□□□□□ -0.34
BRF1-218ENST00000550692 EVCP57679 992 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 SP2Q02086 613 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 RABEP1Q15276 862 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 UBE2SQ16763 222 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
BRF1-218ENST00000550692 FAM126BQ8IXS8 530 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 BADQ92934 168 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 UBE2OQ9C0C9 1292 aaKnown RBP12.93□□□□□ -0.34
BRF1-218ENST00000550692 TMEM39AQ9NV64 488 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 RTEL1Q9NZ71 1219 aa12.93□□□□□ -0.34
BRF1-218ENST00000550692 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 MROH7Q68CQ1 1323 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 STXBP3O00186 592 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 SORBS3O60504 671 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 PPFIA3O75145 1194 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 RAG1P15918 1043 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 NEK4P51957 841 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 NAPAP54920 295 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
BRF1-218ENST00000550692 NTRK3Q16288 839 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 PHKBQ93100 1093 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
BRF1-218ENST00000550692 ALDH8A1Q9H2A2 487 aaPredicted RBP12.92□□□□□ -0.34
BRF1-218ENST00000550692 NCOA5Q9HCD5 579 aaKnown RBP12.92□□□□□ -0.34
BRF1-218ENST00000550692 PDRG1Q9NUG6 133 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 NID2Q14112 1375 aa12.92□□□□□ -0.34
BRF1-218ENST00000550692 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
BRF1-218ENST00000550692 GGPS1O95749 300 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 CD4P01730 458 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 MMP3P08254 477 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 PKN1Q16512 942 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 PFKFB3Q16875 520 aaPredicted RBP12.91□□□□□ -0.34
BRF1-218ENST00000550692 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
BRF1-218ENST00000550692 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
BRF1-218ENST00000550692 EMID1Q96A84 441 aaPredicted RBP12.91□□□□□ -0.34
BRF1-218ENST00000550692 INPP4AQ96PE3 977 aaPredicted RBP12.91□□□□□ -0.34
BRF1-218ENST00000550692 TRPV6Q9H1D0 765 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms