RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
PDE1B-207ENST00000550620 EMC10Q5UCC4 262 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 CNPY4Q8N129 248 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 OTUD6BQ8N6M0 293 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 WHAMMQ8TF30 809 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 KAT2BQ92831 832 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 PAGR1Q9BTK6 254 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 LRRC27Q9C0I9 530 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 MKNK2Q9HBH9 465 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 SAMM50Q9Y512 469 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 BUB1O43683 1085 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 CYTH3O43739 400 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 CCDC91Q7Z6B0 441 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 IQCKQ8N0W5 287 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.61■□□□□ 0.25
PDE1B-207ENST00000550620 SYN2Q92777 582 aaPredicted RBP16.61■□□□□ 0.25
PDE1B-207ENST00000550620 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 RIC8AQ9NPQ8 531 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 PALM3A6NDB9 673 aaPredicted RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 GUCY2DQ02846 1103 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 SOGA3Q5TF21 947 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 C12orf60Q5U649 245 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 EPN3Q9H201 632 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 SALL4Q9UJQ4 1053 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 NFU1Q9UMS0 254 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 KRT14P02533 472 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 SERPING1P05155 500 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 GLI1P08151 1106 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 HNRNPH1P31943 449 aaKnown RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 LSP1P33241 339 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 SLC1A4P43007 532 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 ATP1A2P50993 1020 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 PSMD2Q13200 908 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 KCTD16Q68DU8 428 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 PROM2Q8N271 834 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 LARP4BQ92615 738 aaKnown RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 HPS3Q969F9 1004 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 NCAPGQ9BPX3 1015 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 MMTAG2Q9BU76 263 aaKnown RBP16.6■□□□□ 0.25
PDE1B-207ENST00000550620 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 CEP72Q9P209 647 aa16.6■□□□□ 0.25
PDE1B-207ENST00000550620 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 ROBO3Q96MS0 1386 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 SMCO2A6NFE2 343 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
PDE1B-207ENST00000550620 SRRM3A6NNA2 597 aaPredicted RBP16.59■□□□□ 0.25
PDE1B-207ENST00000550620 HMGB1P1B2RPK0 211 aaPredicted RBP16.59■□□□□ 0.25
PDE1B-207ENST00000550620 H0YHG0 523 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 NR1D1P20393 614 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 PRDX5P30044 214 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 HIBADHP31937 336 aaKnown RBP16.59■□□□□ 0.25
PDE1B-207ENST00000550620 TNNC1P63316 161 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 TMEM266Q2M3C6 531 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 SFMBT2Q5VUG0 894 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 HGSNATQ68CP4 663 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 SPTY2D1Q68D10 685 aaPredicted RBP16.59■□□□□ 0.25
PDE1B-207ENST00000550620 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 SH2D3CQ8N5H7 860 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
PDE1B-207ENST00000550620 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
PDE1B-207ENST00000550620 MYMKA6NI61 221 aa16.58■□□□□ 0.25
PDE1B-207ENST00000550620 FSBPO95073 299 aa16.58■□□□□ 0.25
PDE1B-207ENST00000550620 MNAT1P51948 309 aa16.58■□□□□ 0.25
PDE1B-207ENST00000550620 SLC35G1Q2M3R5 365 aa16.58■□□□□ 0.25
PDE1B-207ENST00000550620 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.25
PDE1B-207ENST00000550620 ZNF444Q8N0Y2 327 aaPredicted RBP16.58■□□□□ 0.25
PDE1B-207ENST00000550620 RNPC3Q96LT9 517 aaKnown RBP16.58■□□□□ 0.25
PDE1B-207ENST00000550620 MYCBPQ99417 103 aaPredicted RBP16.58■□□□□ 0.25
PDE1B-207ENST00000550620 RAB34Q9BZG1 259 aa16.58■□□□□ 0.25
PDE1B-207ENST00000550620 CAPN7Q9Y6W3 813 aa16.58■□□□□ 0.25
PDE1B-207ENST00000550620 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 ZNF233A6NK53 670 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 PALMO75781 387 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 PPP1R37O75864 691 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 GRB10Q13322 594 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 NAB2Q15742 525 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 FBXW10Q5XX13 1052 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 ARFGAP2Q8N6H7 521 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 EIF1ADQ8N9N8 165 aaKnown RBP16.58■□□□□ 0.24
PDE1B-207ENST00000550620 ATP6V1G3Q96LB4 118 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 SLAIN2Q9P270 581 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 GGA2Q9UJY4 613 aa16.58■□□□□ 0.24
PDE1B-207ENST00000550620 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 TBCKQ8TEA7 893 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 BLOC1S4Q9NUP1 217 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms