RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GALNT18Q6P9A2 607 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 CEP128Q6ZU80 1094 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 CEP68Q76N32 757 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 C16orf59Q7L2K0 433 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 NLRP10Q86W26 655 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 DDX42Q86XP3 938 aaKnown RBP eCLIP6.84□□□□□ -1.31
LIMA1-205ENST00000550592 OXR1Q8N573 874 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 IGSF22Q8N9C0 903 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 PLEKHO2Q8TD55 490 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 FBXW5Q969U6 566 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 TMEM169Q96HH4 297 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 MTA3Q9BTC8 594 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 PRDM7Q9NQW5 492 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 CLDND1Q9NY35 253 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 GULP1Q9UBP9 304 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 ACSL6Q9UKU0 697 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 ANGEL1Q9UNK9 670 aaKnown RBP6.84□□□□□ -1.31
LIMA1-205ENST00000550592 X6R8D5 127 aa6.84□□□□□ -1.31
LIMA1-205ENST00000550592 FITM1A5D6W6 292 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 CBX4O00257 560 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
LIMA1-205ENST00000550592 CDK11BP21127 795 aaKnown RBP6.83□□□□□ -1.32
LIMA1-205ENST00000550592 HK2P52789 917 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 SLC14A2Q15849 920 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 FAM47CQ5HY64 1035 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 PI4K2BQ8TCG2 481 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 SP110Q9HB58 689 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 C19orf73Q9NVV2 129 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 COQ6Q9Y2Z9 468 aa6.83□□□□□ -1.32
LIMA1-205ENST00000550592 CCDC66A2RUB6 948 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 C22orf46C9J442 243 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 ADAMTS4O75173 837 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 WNT11O96014 354 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 CPEP16870 476 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 GDNFP39905 211 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 MECP2P51608 486 aaKnown RBP6.82□□□□□ -1.32
LIMA1-205ENST00000550592 LACTBP83111 547 aaPredicted RBP6.82□□□□□ -1.32
LIMA1-205ENST00000550592 MVKQ03426 396 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 TMEM177Q53S58 311 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 OVCH1Q7RTY7 1134 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 TEX2Q8IWB9 1127 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 LZTR1Q8N653 840 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 PRPF38AQ8NAV1 312 aaKnown RBP6.82□□□□□ -1.32
LIMA1-205ENST00000550592 AGBL5Q8NDL9 886 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 TRMT2BQ96GJ1 504 aaKnown RBP6.82□□□□□ -1.32
LIMA1-205ENST00000550592 JAM3Q9BX67 310 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 PDLIM7Q9NR12 457 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 MBNL3Q9NUK0 354 aaKnown RBP6.82□□□□□ -1.32
LIMA1-205ENST00000550592 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 MARCH2Q9P0N8 246 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 IMPACTQ9P2X3 320 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 MCM8Q9UJA3 840 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 TAF6LQ9Y6J9 622 aa6.82□□□□□ -1.32
LIMA1-205ENST00000550592 M0R2C6 588 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 TRAF5O00463 557 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 ADAM23O75077 832 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 F2P00734 622 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 HPXP02790 462 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 FUCA1P04066 466 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 PYGMP11217 842 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 CDKN1CP49918 316 aaPredicted RBP6.81□□□□□ -1.32
LIMA1-205ENST00000550592 ST5P78524 1137 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 HABP4Q5JVS0 413 aaKnown RBP6.81□□□□□ -1.32
LIMA1-205ENST00000550592 RIOX2Q8IUF8 465 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 PANK1Q8TE04 598 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 STAG1Q8WVM7 1258 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 KCNJ15Q99712 375 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 PLCD4Q9BRC7 762 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
LIMA1-205ENST00000550592 DDX56Q9NY93 547 aaKnown RBP6.81□□□□□ -1.32
LIMA1-205ENST00000550592 B4GALT6Q9UBX8 382 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 ADAMTS6Q9UKP5 1117 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 CBLCQ9ULV8 474 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 RWDD3Q9Y3V2 267 aa6.81□□□□□ -1.32
LIMA1-205ENST00000550592 A0A1W2PQ27 194 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 A0A1W2PQ64 194 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 A0A1W2PQC6 194 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 A0A1W2PQD8 194 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 BRINP1O60477 761 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 MSL3P1P0C860 447 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 BPIP17213 487 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 PRKCAP17252 672 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 FPR2P25090 351 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 PMLP29590 882 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 DNM2P50570 870 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 SCNN1BP51168 640 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 STRN3Q13033 797 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 SNX17Q15036 470 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 PLCL1Q15111 1095 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 CRY1Q16526 586 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 MROH9Q5TGP6 573 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 TP53INP2Q8IXH6 220 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 OR2W6PQ8NHA6 318 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 EPB41L1Q9H4G0 881 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 CABP5Q9NP86 173 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 CATSPERZQ9NTU4 200 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 PCMTD2Q9NV79 361 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 FBLN5Q9UBX5 448 aa6.8□□□□□ -1.32
LIMA1-205ENST00000550592 ZEB2O60315 1214 aa6.79□□□□□ -1.32
LIMA1-205ENST00000550592 PSPNO60542 156 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms