RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GH1P01241 217 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 CXCL10P02778 98 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 SELPP16109 830 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 PDE1AP54750 535 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 ARHGAP1Q07960 439 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 KRT40Q6A162 431 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 GDF6Q6KF10 455 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 MFSD6Q6ZSS7 791 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 NSUN6Q8TEA1 469 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 PPP1R13LQ8WUF5 828 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 KAT2BQ92831 832 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 EMID1Q96A84 441 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
TRAFD1-207ENST00000550051 MYH7BA7E2Y1 1941 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 A0A0D9SFI3 127 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 MMP3P08254 477 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 KCNJ6P48051 423 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 WDR5P61964 334 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 STXBP2Q15833 593 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 DGKDQ16760 1214 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 CNKSR3Q6P9H4 555 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 LRRC8DQ7L1W4 858 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 MCF2L2Q86YR7 1114 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 SYTL5Q8TDW5 730 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 TBC1D5Q92609 795 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 TAAR1Q96RJ0 339 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 RAD9AQ99638 391 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 RNF41Q9H4P4 317 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 EPHX3Q9H6B9 360 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 DDX41Q9UJV9 622 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 ABCB11O95342 1321 aa11.54□□□□□ -0.56
TRAFD1-207ENST00000550051 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 HAS3O00219 553 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 EFCAB14O75071 495 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 GJB5O95377 273 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 CKBP12277 381 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 ERVK-21P61565 698 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 USH1GQ495M9 461 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 CCDC178Q5BJE1 867 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 ESR2Q92731 530 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 LRFN3Q9BTN0 628 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 SUGCTQ9HAC7 445 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 GTF2IRD1Q9UHL9 959 aa11.53□□□□□ -0.56
TRAFD1-207ENST00000550051 LCHNA4D1U4 455 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 ZNF213O14771 459 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 GPR37L1O60883 481 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 NBNO60934 754 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 PPFIA4O75335 1185 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 MFAP1P55081 439 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 HAND2P61296 217 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 NMIQ13287 307 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 PTK7Q13308 1070 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 HDAC1Q13547 482 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 LAMC2Q13753 1193 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 IKBKEQ14164 716 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 SEPT14Q6ZU15 432 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 SPRED2Q7Z698 418 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 ZNF589Q86UQ0 364 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 ADGRF4Q8IZF3 695 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 C7orf31Q8N865 590 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 RMDN3Q96TC7 470 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 KATNAL1Q9BW62 490 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 MRPL11Q9Y3B7 192 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 MYH6P13533 1939 aa11.52□□□□□ -0.57
TRAFD1-207ENST00000550051 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 F2P00734 622 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 HOXD8P13378 290 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 PSEN2P49810 448 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 CHMP4BP1P59074 171 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 DEFB103AP81534 67 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 GHRHRQ02643 423 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 CDC37Q16543 378 aaPredicted RBP11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 TRIM71Q2Q1W2 868 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 TMEM31Q5JXX7 168 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 IQCA1Q86XH1 822 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 TBC1D10CQ8IV04 446 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 PPTC7Q8NI37 304 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 TGS1Q96RS0 853 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
TRAFD1-207ENST00000550051 LINC01553A4QN01 128 aa11.5□□□□□ -0.57
TRAFD1-207ENST00000550051 NR3C2P08235 984 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms