RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 NT5C3AQ9H0P0 336 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 PSMA7O14818 248 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 LMNB1P20700 586 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 ZNF76P36508 570 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 STAT3P40763 770 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 PRAMEF18Q5VWM3 479 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 SPECC1LQ69YQ0 1117 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 PRPF38AQ8NAV1 312 aaKnown RBP21.43■■□□□ 1.02
BRF1-215ENST00000549655 FAM20AQ96MK3 541 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 SLF1Q9BQI6 1058 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 LRRC27Q9C0I9 530 aa21.43■■□□□ 1.02
BRF1-215ENST00000549655 ADD3Q9UEY8 706 aaKnown RBP21.43■■□□□ 1.02
BRF1-215ENST00000549655 TRIM49BA6NDI0 452 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 PMS1P54277 932 aaKnown RBP21.42■■□□□ 1.02
BRF1-215ENST00000549655 STK4Q13043 487 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 DGKZQ13574 1117 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 CNNM4Q6P4Q7 775 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 GPC2Q8N158 579 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 CYP2W1Q8TAV3 490 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 AGBL1Q96MI9 1066 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 SPON1Q9HCB6 807 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 UTRNP46939 3433 aa21.42■■□□□ 1.02
BRF1-215ENST00000549655 PVALEFA0A1B0GWK0 134 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 MSH4O15457 936 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 SLC26A4O43511 780 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 ICAM1P05362 532 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 FCER1AP12319 257 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 SPIRE1Q08AE8 756 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 MTMR2Q13614 643 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 UNC13DQ70J99 1090 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 DYMQ7RTS9 669 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 HOOK2Q96ED9 719 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 DHTKD1Q96HY7 919 aaPredicted RBP21.41■■□□□ 1.02
BRF1-215ENST00000549655 CCPG1Q9ULG6 757 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 KIAA1024Q9UPX6 916 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 R3HCC1Q9Y3T6 440 aaKnown RBP21.41■■□□□ 1.02
BRF1-215ENST00000549655 TBX2Q13207 712 aaPredicted RBP21.41■■□□□ 1.02
BRF1-215ENST00000549655 FILIP1LQ4L180 1135 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 DDX12PQ92771 950 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 TANGO6Q9C0B7 1094 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 LIMA1Q9UHB6 759 aaKnown RBP21.41■■□□□ 1.02
BRF1-215ENST00000549655 ZNF112Q9UJU3 913 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 ZNF536O15090 1300 aa21.41■■□□□ 1.02
BRF1-215ENST00000549655 TEX33O43247 280 aa21.4■■□□□ 1.02
BRF1-215ENST00000549655 SPAG1Q07617 926 aa21.4■■□□□ 1.02
BRF1-215ENST00000549655 KRT31Q15323 416 aa21.4■■□□□ 1.02
BRF1-215ENST00000549655 SCYL3Q8IZE3 742 aa21.4■■□□□ 1.02
BRF1-215ENST00000549655 WRNIP1Q96S55 665 aa21.4■■□□□ 1.02
BRF1-215ENST00000549655 GGA3Q9NZ52 723 aa21.4■■□□□ 1.02
BRF1-215ENST00000549655 DICER1Q9UPY3 1922 aaKnown RBP21.4■■□□□ 1.02
BRF1-215ENST00000549655 POTEB3A0JP26 581 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 LRRC10BA6NIK2 292 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 POTECB2RU33 542 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 KCNJ18B7U540 433 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 NRDCO43847 1150 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 VCAM1P19320 739 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 EPS15P42566 896 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 KCNJ12Q14500 433 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 TCP11X2Q5H9J9 407 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 HAUS3Q68CZ6 603 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 POTEBQ6S5H4 581 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 HPS3Q969F9 1004 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 ZKSCAN4Q969J2 545 aaPredicted RBP21.39■■□□□ 1.02
BRF1-215ENST00000549655 EHMT1Q9H9B1 1298 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 EMILIN3Q9NT22 766 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 DOCK1Q14185 1865 aa21.39■■□□□ 1.02
BRF1-215ENST00000549655 IGLV3-22A0A075B6J6 115 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 MED24O75448 989 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 PPP1R2P41236 205 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 SPP2Q13103 211 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 NCAPH2Q6IBW4 605 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 TTI2Q6NXR4 508 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 KIAA0895Q8NCT3 520 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 ANKRD20A12PQ8NF67 263 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 ERMNQ8TAM6 284 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 TRIM47Q96LD4 638 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 SLC39A2Q9NP94 309 aa21.39■■□□□ 1.01
BRF1-215ENST00000549655 E9PMD0 336 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 FLOT1O75955 427 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 IDEP14735 1019 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 HIRAP54198 1017 aaPredicted RBP21.38■■□□□ 1.01
BRF1-215ENST00000549655 USP14P54578 494 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 GOLGA8FQ08AF8 430 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 GOLGA8DPQ0D2H9 430 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 COBLL1Q53SF7 1204 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 IRF2BP1Q8IU81 584 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 CREBRFQ8IUR6 639 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 P2RX5Q93086 422 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 WDR18Q9BV38 432 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 FHDC1Q9C0D6 1143 aaPredicted RBP21.38■■□□□ 1.01
BRF1-215ENST00000549655 PICK1Q9NRD5 415 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 FZD1Q9UP38 647 aa21.38■■□□□ 1.01
BRF1-215ENST00000549655 SSBP05455 408 aaKnown RBP eCLIP21.37■■□□□ 1.01
BRF1-215ENST00000549655 CCNE1P24864 410 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 UBXN2AP68543 259 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 RPAP3Q9H6T3 665 aaPredicted RBP21.37■■□□□ 1.01
BRF1-215ENST00000549655 SLC38A10Q9HBR0 1119 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 VAV3Q9UKW4 847 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 BICDL2A1A5D9 508 aa21.37■■□□□ 1.01
BRF1-215ENST00000549655 PLA2G4BP0C869 781 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms