RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
RAB5B-206ENST00000549505 C17orf53Q8N3J3 647 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-206ENST00000549505 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 P2RX5Q93086 422 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.19□□□□□ -0.62
RAB5B-206ENST00000549505 PHLPP2Q6ZVD8 1323 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
RAB5B-206ENST00000549505 ASNSP08243 561 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 BCRP11274 1271 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 TNFAIP1Q13829 316 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 FILIP1LQ4L180 1135 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 KRT79Q5XKE5 535 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 A0A1W2PQJ5 194 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 MYMKA6NI61 221 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 GDF11O95390 407 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 SLURP2P0DP57 97 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 CDK17Q00537 523 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 FAM114A1Q8IWE2 563 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 KIAA0895Q8NCT3 520 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 WDR18Q9BV38 432 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 TTYH3Q9C0H2 523 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
RAB5B-206ENST00000549505 KCNJ18B7U540 433 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 CTNND1O60716 968 aaKnown RBP11.18□□□□□ -0.62
RAB5B-206ENST00000549505 RAD17O75943 681 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 RPA1P27694 616 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 PPP2R5CQ13362 524 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 KCNJ12Q14500 433 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 C12orf42Q96LP6 360 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 PPP2R3BQ9Y5P8 575 aa11.18□□□□□ -0.62
RAB5B-206ENST00000549505 FAM196BA6NMK8 535 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 AKR1B15C9JRZ8 316 aaPredicted RBP11.17□□□□□ -0.62
RAB5B-206ENST00000549505 WDR46O15213 610 aaKnown RBP11.17□□□□□ -0.62
RAB5B-206ENST00000549505 MFAP3LO75121 409 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 CDC25AP30304 524 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 TXKP42681 527 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 NFIL3Q16649 462 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 CNGA4Q8IV77 575 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 SLC5A5Q92911 643 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 ERGIC2Q96RQ1 377 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 PCDHA12Q9UN75 941 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 POLD1P28340 1107 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 ECM1Q16610 540 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 BMT2Q1RMZ1 405 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 DNAJC7Q99615 494 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 EXOC1Q9NV70 894 aa11.17□□□□□ -0.62
RAB5B-206ENST00000549505 MRPL11Q9Y3B7 192 aaKnown RBP11.17□□□□□ -0.62
RAB5B-206ENST00000549505 WDR90Q96KV7 1748 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 TCP10L2B9ZVM9 353 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 CDK11BP21127 795 aaKnown RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 HNRNPH3P31942 346 aaKnown RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 BAG1Q99933 345 aaPredicted RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 TUFT1Q9NNX1 390 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 ZNF536O15090 1300 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 TEX33O43247 280 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 ZSCAN12O43309 604 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 GYPCP04921 128 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 ICAM1P05362 532 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 TNNT1P13805 278 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 STK4Q13043 487 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 MEA1Q16626 185 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 NOL9Q5SY16 702 aaKnown RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 HAUS3Q68CZ6 603 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 EPM2AIP1Q7L775 607 aaPredicted RBP11.16□□□□□ -0.62
RAB5B-206ENST00000549505 MB21D1Q8N884 522 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 ACER1Q8TDN7 264 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 HOOK2Q96ED9 719 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 EDEM3Q9BZQ6 932 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 SEMA6BQ9H3T3 888 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 ADAMTS5Q9UNA0 930 aa11.16□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L15C9J2P7 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L11C9JVI0 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L18D6R9N7 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L22D6RA61 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L19D6RCP7 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L20D6RJB6 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 SPATA31C1P0DKV0 1188 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 DNM2P50570 870 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L24Q0WX57 530 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 CEP135Q66GS9 1140 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 USP17L6PQ6QN14 398 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 KCNK18Q7Z418 384 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
RAB5B-206ENST00000549505 SNX29Q8TEQ0 813 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms