RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 PLCD1P51178 756 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 TIMM10P62072 90 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 CNTN2Q02246 1040 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 ICA1Q05084 483 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 MBTPS1Q14703 1052 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 ZNF528Q3MIS6 628 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 TMEM63BQ5T3F8 832 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 GDF6Q6KF10 455 aaPredicted RBP12.74□□□□□ -0.37
TROAP-209ENST00000549275 RBM23Q86U06 439 aaKnown RBP12.74□□□□□ -0.37
TROAP-209ENST00000549275 C1orf210Q8IVY1 113 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 FBXO16Q8IX29 292 aaPredicted RBP12.74□□□□□ -0.37
TROAP-209ENST00000549275 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 ERVK-5Q9HDB9 667 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 FANCMQ8IYD8 2048 aa12.74□□□□□ -0.37
TROAP-209ENST00000549275 HELZ2Q9BYK8 2649 aaKnown RBP12.74□□□□□ -0.37
TROAP-209ENST00000549275 ADGRA3Q8IWK6 1321 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 CEP295Q9C0D2 2601 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 SRRM3A6NNA2 597 aaPredicted RBP12.73□□□□□ -0.37
TROAP-209ENST00000549275 CYSRT1A8MQ03 144 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 ZBED4O75132 1171 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 CSPG5O95196 566 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 C1QTNF9P0C862 333 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 SP100P23497 879 aaPredicted RBP12.73□□□□□ -0.37
TROAP-209ENST00000549275 OAZ1P54368 228 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 PTK7Q13308 1070 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 SOWAHCQ53LP3 525 aaPredicted RBP12.73□□□□□ -0.37
TROAP-209ENST00000549275 N4BP2L1Q5TBK1 243 aaPredicted RBP12.73□□□□□ -0.37
TROAP-209ENST00000549275 ADGRA1Q86SQ6 560 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 OR6J1Q8NGC5 347 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
TROAP-209ENST00000549275 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 SEPT8Q92599 483 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 GOPCQ9HD26 462 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
TROAP-209ENST00000549275 BPTFQ12830 3046 aa12.73□□□□□ -0.37
TROAP-209ENST00000549275 NKRFO15226 690 aaKnown RBP eCLIP12.72□□□□□ -0.37
TROAP-209ENST00000549275 ASGR2P07307 311 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 ARP10275 920 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 ZNF618Q5T7W0 954 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 SIX5Q8N196 739 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 PRPF38AQ8NAV1 312 aaKnown RBP12.72□□□□□ -0.37
TROAP-209ENST00000549275 MORC4Q8TE76 937 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 PPP1R13LQ8WUF5 828 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
TROAP-209ENST00000549275 TRIP12Q14669 1992 aaPredicted RBP12.72□□□□□ -0.37
TROAP-209ENST00000549275 APAF1O14727 1248 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 DNAJB1P25685 340 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.37
TROAP-209ENST00000549275 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
TROAP-209ENST00000549275 FAM83BQ5T0W9 1011 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 EEPD1Q7L9B9 569 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 GMEB2Q9UKD1 530 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.37
TROAP-209ENST00000549275 PCDHGA2Q9Y5H1 932 aa12.71□□□□□ -0.37
TROAP-209ENST00000549275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
TROAP-209ENST00000549275 RBM47A0AV96 593 aaKnown RBP12.7□□□□□ -0.38
TROAP-209ENST00000549275 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 VAMP4O75379 141 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 TDGQ13569 410 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 DUSP6Q16828 381 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 TDRD5Q8NAT2 981 aaKnown RBP12.7□□□□□ -0.38
TROAP-209ENST00000549275 VN1R2Q8NFZ6 395 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 POF1BQ8WVV4 589 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 LIMD1Q9UGP4 676 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 GTF2IRD1Q9UHL9 959 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 DUSP12Q9UNI6 340 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 USTQ9Y2C2 406 aa12.7□□□□□ -0.38
TROAP-209ENST00000549275 SMG1Q96Q15 3661 aaKnown RBP12.7□□□□□ -0.38
TROAP-209ENST00000549275 LOC102724159A0A0B4J2E5 919 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
TROAP-209ENST00000549275 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 STK25O00506 426 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
TROAP-209ENST00000549275 ITGB1P05556 798 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 RFX1P22670 979 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 TECP42680 631 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 DYNLL1P63167 89 aaKnown RBP12.69□□□□□ -0.38
TROAP-209ENST00000549275 KCNC3Q14003 757 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 PWP2Q15269 919 aaKnown RBP12.69□□□□□ -0.38
TROAP-209ENST00000549275 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 RASGRP4Q8TDF6 673 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 APBB2Q92870 758 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
TROAP-209ENST00000549275 SLC38A10Q9HBR0 1119 aa12.69□□□□□ -0.38
TROAP-209ENST00000549275 RAVER2Q9HCJ3 691 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms