RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 CHMP4CQ96CF2 233 aa11.53□□□□□ -0.56
CALCOCO1-212ENST00000549173 TMEM47Q9BQJ4 181 aa11.53□□□□□ -0.56
CALCOCO1-212ENST00000549173 SUGCTQ9HAC7 445 aa11.53□□□□□ -0.56
CALCOCO1-212ENST00000549173 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
CALCOCO1-212ENST00000549173 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
CALCOCO1-212ENST00000549173 LINC01553A4QN01 128 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 ARIH2O95376 493 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 MMP3P08254 477 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 ALADP13716 330 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 ARHGAP1Q07960 439 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 IKBKEQ14164 716 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 GDF6Q6KF10 455 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 SPRED2Q7Z698 418 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 GJD3Q8N144 294 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 GDPD5Q8WTR4 605 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 DHX38Q92620 1227 aaKnown RBP11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 KAT2BQ92831 832 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 IWS1Q96ST2 819 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 KATNAL1Q9BW62 490 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 KCNH6Q9H252 994 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 CD320Q9NPF0 282 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 INCENPQ9NQS7 918 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 GTF2IRD1Q9UHL9 959 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 CTNNA3Q9UI47 895 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 ZMYM6O95789 1325 aa11.52□□□□□ -0.57
CALCOCO1-212ENST00000549173 SIP14410 1827 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 NBNO60934 754 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 IGHDP01880 384 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 FGAP02671 866 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 CKBP12277 381 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 SDSP20132 328 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 DEFB103AP81534 67 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 PTK7Q13308 1070 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 DGKDQ16760 1214 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 NSUN6Q8TEA1 469 aaKnown RBP11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 DIAPH3Q9NSV4 1193 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 INSL6Q9Y581 213 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 FRMPD2Q68DX3 1309 aaPredicted RBP11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 EMSYQ7Z589 1322 aa11.51□□□□□ -0.57
CALCOCO1-212ENST00000549173 COL4A6Q14031 1691 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 FAM86C2PA6NEL3 165 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 HAS3O00219 553 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 F2P00734 622 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 HTRA4P83105 476 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 STXBP2Q15833 593 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 PTPROQ16827 1216 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 TRIM71Q2Q1W2 868 aaKnown RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 TRAF7Q6Q0C0 670 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 MFSD6Q6ZSS7 791 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 C7orf31Q8N865 590 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 PPP1R13LQ8WUF5 828 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 ABCB11O95342 1321 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 TRIP12Q14669 1992 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO1-212ENST00000549173 BRWD1Q9NSI6 2320 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 ZNF213O14771 459 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 LGR5O75473 907 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 HOXD8P13378 290 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 KCNA5P22460 613 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 PSEN2P49810 448 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 TIGD5Q53EQ6 642 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 VPS53Q5VIR6 699 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 PTCRAQ6ISU1 281 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 TMCO2Q7Z6W1 182 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 MCF2L2Q86YR7 1114 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 SYTL5Q8TDW5 730 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 FAM227BQ96M60 508 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 FAM50BQ9Y247 325 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
CALCOCO1-212ENST00000549173 A0A0D9SFI3 127 aa11.48□□□□□ -0.57
CALCOCO1-212ENST00000549173 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
CALCOCO1-212ENST00000549173 PPFIA4O75335 1185 aa11.48□□□□□ -0.57
CALCOCO1-212ENST00000549173 AMHP03971 560 aa11.48□□□□□ -0.57
CALCOCO1-212ENST00000549173 CHMP4BP1P59074 171 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms