RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 JRKLQ9Y4A0 524 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 GOLGA6CA6NDK9 693 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 LDHCP07864 332 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 GOLGA6DP0CG33 693 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 SLC1A4P43007 532 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 SPATA4Q8NEY3 305 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 DDX12PQ92771 950 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 RPGRIP1Q96KN7 1286 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 OSBPL9Q96SU4 736 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 GOLGA6AQ9NYA3 693 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 ESYT3A0FGR9 886 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 ANO9A1A5B4 782 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 UFL1O94874 794 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 MAN2A1Q16706 1144 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 TSGA10Q9BZW7 698 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 SLC16A2P36021 539 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 CENPPQ6IPU0 288 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 IFT81Q8WYA0 676 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 ANKS1AQ92625 1134 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 MAGEF1Q9HAY2 307 aa13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-219ENST00000549151 SCN7AQ01118 1682 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 TM4SF1P30408 202 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 PAFAH1B1P43034 410 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 TARSL2A2RTX5 802 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 AGPSO00116 658 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 FTCDO95954 541 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 ADCY7P51828 1080 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 MFSD14BQ5SR56 506 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 UNC13DQ70J99 1090 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 RTFDC1Q9BY42 306 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 VIPAS39Q9H9C1 493 aa13.21□□□□□ -0.29
RAPGEF3-219ENST00000549151 DLEC1Q9Y238 1755 aa13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 POLR2FP61218 127 aaKnown RBP13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 KCTD16Q68DU8 428 aa13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 TSG101Q99816 390 aa13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 HYOU1Q9Y4L1 999 aa13.21□□□□□ -0.3
RAPGEF3-219ENST00000549151 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 DNAAF5Q86Y56 855 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 RFC4P35249 363 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 ECM1Q16610 540 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 LSM14BQ9BX40 385 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 FGFBP2Q9BYJ0 223 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 TSPYL1Q9H0U9 437 aa13.2□□□□□ -0.3
RAPGEF3-219ENST00000549151 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 TTBK2Q6IQ55 1244 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 RAD54LQ92698 747 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 THRAP3Q9Y2W1 955 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 A0A1W2PQJ5 194 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 E9PMD0 336 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 C6orf229H3BNL8 230 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 EPS15P42566 896 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 CCT5P48643 541 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 GUCY2FP51841 1108 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 GPSM2P81274 684 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 MYOCDQ8IZQ8 938 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 MSL3Q8N5Y2 521 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 CCDC88AQ3V6T2 1871 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 PDHBP11177 359 aa13.19□□□□□ -0.3
RAPGEF3-219ENST00000549151 ATP1A2P50993 1020 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms