RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 ERVFC1P60507 584 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 SSRP1Q08945 709 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 SNW1Q13573 536 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 BBS9Q3SYG4 887 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 C2orf27AQ580R0 203 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 EFCAB2Q5VUJ9 269 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 ERICH6BQ5W0A0 696 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 TMEM132EQ6IEE7 984 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 ARHGAP27Q6ZUM4 889 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 ZFPM1Q8IX07 1006 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 SPACA3Q8IXA5 215 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 CCDC144CPQ8IYA2 1237 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF513Q8N8E2 541 aaPredicted RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 FGD4Q96M96 766 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 TEPSINQ96N21 525 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 DUSP23Q9BVJ7 150 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 MKRN2Q9H000 416 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 FANCLQ9NW38 375 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 TMEM260Q9NX78 707 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF451Q9Y4E5 1061 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 TNFRSF18Q9Y5U5 241 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 PTCH2Q9Y6C5 1203 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 BRD4O60885 1362 aaPredicted RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 SBNO2Q9Y2G9 1366 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 CCDC144AA2RUR9 1427 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 SHPRHQ149N8 1683 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 TRPM2O94759 1503 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 A0A1W2PQU0 124 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 ANKRD34BA5PLL1 514 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 TBX1O43435 398 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 CDC45O75419 566 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 BCAR3O75815 825 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 FAM153BP0C7A2 387 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 CD247P20963 164 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 HSD3B2P26439 372 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 CHMP4BP1P59074 171 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 AUHQ13825 339 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 RALBP1Q15311 655 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 NBPF9Q3BBW0 867 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 TKFCQ3LXA3 575 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 PLEKHG4Q58EX7 1191 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 YOD1Q5VVQ6 348 aaPredicted RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 FOXB2Q5VYV0 432 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 HEATR6Q6AI08 1181 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 TRMT2AQ8IZ69 625 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 Q8N1X5 172 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 ABHD4Q8TB40 342 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 THAP3Q8WTV1 239 aaPredicted RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 RNF141Q8WVD5 230 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 SMARCC1Q92922 1105 aaPredicted RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF669Q96BR6 464 aaPredicted RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 NAF1Q96HR8 494 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 Q96M66 194 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 SPATA9Q9BWV2 254 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 EPN3Q9H201 632 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 SLC12A5Q9H2X9 1139 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 MYO5BQ9ULV0 1848 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 SPAG9O60271 1321 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 ARID4BQ4LE39 1312 aaPredicted RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 FANCIQ9NVI1 1328 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 TET3O43151 1660 aa3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 ZC3H13Q5T200 1668 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-206ENST00000549100 NOS1P29475 1434 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ASXL2Q76L83 1435 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF518AQ6AHZ1 1483 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ATP7AQ04656 1500 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ZMYM4Q5VZL5 1548 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ASXL1Q8IXJ9 1541 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 SYNMO15061 1565 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ANKRD62A6NC57 917 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 PRR33A8MZF0 331 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 RAPGEF3O95398 923 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 IGHDP01880 384 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ITGAVP06756 1048 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 CANXP27824 592 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ETV3P41162 512 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 GRIA2P42262 883 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF143P52747 638 aaPredicted RBP3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 RNF4P78317 190 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 RTP5Q14D33 572 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 NKPD1Q17RQ9 610 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 SV2CQ496J9 727 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ANKRD39Q53RE8 183 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF385BQ569K4 471 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 TMC3Q7Z5M5 1100 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF227Q86WZ6 799 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 C7orf61Q8IZ16 206 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ADCY4Q8NFM4 1077 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 APPBP2Q92624 585 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 BRF1Q92994 677 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 EXOC2Q96KP1 924 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ASPNQ9BXN1 380 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 PRDM14Q9GZV8 571 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 GP6Q9HCN6 339 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 ARHGEF4Q9NR80 690 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 RCAN3Q9UKA8 241 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 TPX2Q9ULW0 747 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 MINPP1Q9UNW1 487 aa3.1□□□□□ -1.91
DEPDC4-206ENST00000549100 MAP3K4Q9Y6R4 1608 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms