RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CPT1AP50416 773 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 NAPAP54920 295 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 NKX3-2P78367 333 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 CCT2P78371 535 aaKnown RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 CCDC62Q6P9F0 684 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 TRIM43Q96BQ3 446 aaPredicted RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 GDF15Q99988 308 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 LBHD1Q9BQE6 289 aaPredicted RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
DDX54-205ENST00000548786 ELP1O95163 1332 aa18.17■□□□□ 0.5
DDX54-205ENST00000548786 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
DDX54-205ENST00000548786 RGS20O76081 388 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 TOB2Q14106 344 aaPredicted RBP18.16■□□□□ 0.5
DDX54-205ENST00000548786 C1orf53Q5VUE5 145 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 TYW1BQ6NUM6 668 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 VSIG10LQ86VR7 867 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 SAMD3Q8N6K7 520 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 AFG1LQ8WV93 481 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 UBE2OQ9C0C9 1292 aaKnown RBP18.16■□□□□ 0.5
DDX54-205ENST00000548786 PRO3102Q9H379 93 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 RTEL1Q9NZ71 1219 aa18.16■□□□□ 0.5
DDX54-205ENST00000548786 LTBP2Q14767 1821 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 DCDC2CA8MYV0 355 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 ARVCFO00192 962 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 SEC24BO95487 1268 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 GH1P01241 217 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 ARHGAP1Q07960 439 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 FAAP100Q0VG06 881 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 STK3Q13188 491 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 BADQ92934 168 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 PHKBQ93100 1093 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
DDX54-205ENST00000548786 DDX41Q9UJV9 622 aaKnown RBP18.15■□□□□ 0.5
DDX54-205ENST00000548786 STXBP3O00186 592 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 ITGB8P26012 769 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 PDIA3P30101 505 aaKnown RBP18.14■□□□□ 0.49
DDX54-205ENST00000548786 RCAN1P53805 252 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 MRPS9P82933 396 aaKnown RBP18.14■□□□□ 0.49
DDX54-205ENST00000548786 PURAQ00577 322 aaKnown RBP18.14■□□□□ 0.49
DDX54-205ENST00000548786 ITGA7Q13683 1181 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 BRDTQ58F21 947 aaPredicted RBP18.14■□□□□ 0.49
DDX54-205ENST00000548786 ANKRD33Q7Z3H0 272 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 PGBD1Q96JS3 809 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 AGXT2Q9BYV1 514 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 POLR3EQ9NVU0 708 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 GRIN2DO15399 1336 aa18.14■□□□□ 0.49
DDX54-205ENST00000548786 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
DDX54-205ENST00000548786 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
DDX54-205ENST00000548786 CABYRO75952 493 aa18.13■□□□□ 0.49
DDX54-205ENST00000548786 CDK7P50613 346 aa18.13■□□□□ 0.49
DDX54-205ENST00000548786 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
DDX54-205ENST00000548786 TM6SF1Q9BZW5 370 aa18.13■□□□□ 0.49
DDX54-205ENST00000548786 FRMPD4Q14CM0 1322 aa18.13■□□□□ 0.49
DDX54-205ENST00000548786 A6NJR5 290 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 SPDYE3A6NKU9 549 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 GGPS1O95749 300 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 MMP3P08254 477 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 RAG1P15918 1043 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 UBA1P22314 1058 aaKnown RBP18.12■□□□□ 0.49
DDX54-205ENST00000548786 ADCY7P51828 1080 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 SP2Q02086 613 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 FAM47CQ5HY64 1035 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 FAM126BQ8IXS8 530 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
DDX54-205ENST00000548786 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 PPP1R12CQ9BZL4 782 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 TRPV6Q9H1D0 765 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 MROH7Q68CQ1 1323 aa18.12■□□□□ 0.49
DDX54-205ENST00000548786 SMCO2A6NFE2 343 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 DTNBO60941 627 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 ZNF286BP0CG31 522 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 SCG2P13521 617 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 PFKFB3Q16875 520 aaPredicted RBP18.11■□□□□ 0.49
DDX54-205ENST00000548786 SPATA33Q96N06 139 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 TOX2Q96NM4 488 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 BCAS3Q9H6U6 928 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 TMEM260Q9NX78 707 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 BARHL2Q9NY43 387 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 PCDHA6Q9UN73 950 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 PCDHA8Q9Y5H6 950 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 NID2Q14112 1375 aa18.11■□□□□ 0.49
DDX54-205ENST00000548786 MYH7BA7E2Y1 1941 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 KIAA0355O15063 1070 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 TLR3O15455 904 aaKnown RBP18.1■□□□□ 0.49
DDX54-205ENST00000548786 B4GALT4O60513 344 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX54-205ENST00000548786 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
DDX54-205ENST00000548786 SP4Q02446 784 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 NBPF20Q3BBV1 942 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 GNPTABQ3T906 1256 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 PCNX4Q63HM2 1172 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 PPP1R18Q6NYC8 613 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 SLC43A3Q8NBI5 491 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 RIC8AQ9NPQ8 531 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 TRMT13Q9NUP7 481 aaKnown RBP18.1■□□□□ 0.49
DDX54-205ENST00000548786 PKD2L1Q9P0L9 805 aa18.1■□□□□ 0.49
DDX54-205ENST00000548786 BMP8BP34820 402 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms