RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 BDH2Q9BUT1 245 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 MARCH2Q9P0N8 246 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 PRICKLE3O43900 615 aaPredicted RBP6.7□□□□□ -1.34
CCDC38-206ENST00000548771 C8BP07358 591 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 PLP2Q04941 152 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 FXNQ16595 210 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
CCDC38-206ENST00000548771 LARP1BQ659C4 914 aaKnown RBP6.7□□□□□ -1.34
CCDC38-206ENST00000548771 NLRP10Q86W26 655 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 DCP2Q8IU60 420 aaKnown RBP6.7□□□□□ -1.34
CCDC38-206ENST00000548771 RCBTB1Q8NDN9 531 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 IGSF5Q9NSI5 407 aa6.7□□□□□ -1.34
CCDC38-206ENST00000548771 TIMM13Q9Y5L4 95 aaPredicted RBP6.7□□□□□ -1.34
CCDC38-206ENST00000548771 C22orf46C9J442 243 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 CPP00450 1065 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 GFRA1P56159 465 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 SV2CQ496J9 727 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 SLC35F1Q5T1Q4 408 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 MROH9Q5TGP6 573 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 CARFQ8N187 725 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 SLC43A3Q8NBI5 491 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 SPATA25Q9BR10 227 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC38-206ENST00000548771 FBXL7Q9UJT9 491 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 NPFFR2Q9Y5X5 522 aa6.69□□□□□ -1.34
CCDC38-206ENST00000548771 NOBOXO60393 691 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 DDAH1O94760 285 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 GJB6O95452 261 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 FPR2P25090 351 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 BCL6P41182 706 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 RPL11P62913 178 aaKnown RBP6.68□□□□□ -1.34
CCDC38-206ENST00000548771 RTP5Q14D33 572 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 SPATS1Q496A3 300 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 ERICH6BQ5W0A0 696 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 DIO2Q92813 273 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 PPP1R14AQ96A00 147 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 BORCS6Q96GS4 357 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 SYT3Q9BQG1 590 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 GORASP1Q9BQQ3 440 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 EPN3Q9H201 632 aa6.68□□□□□ -1.34
CCDC38-206ENST00000548771 ECI1P42126 302 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 GTF2A2P52657 109 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 ARID5AQ03989 594 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 KCNAB2Q13303 367 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 GNL2Q13823 731 aaKnown RBP6.67□□□□□ -1.34
CCDC38-206ENST00000548771 PRSS53Q2L4Q9 553 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 CEP68Q76N32 757 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 C11orf84Q9BUA3 381 aaPredicted RBP6.67□□□□□ -1.34
CCDC38-206ENST00000548771 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
CCDC38-206ENST00000548771 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
CCDC38-206ENST00000548771 KLF4O43474 513 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 SNRPB2P08579 225 aaKnown RBP6.66□□□□□ -1.34
CCDC38-206ENST00000548771 LCP1P13796 627 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 GRIA2P42262 883 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 SLC10A6Q3KNW5 377 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 NT5DC1Q5TFE4 455 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 ETV3LQ6ZN32 361 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 FAM26EQ8N5C1 309 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 TMEM145Q8NBT3 493 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 ZBTB8AQ96BR9 441 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 AP5M1Q9H0R1 490 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 PCDH18Q9HCL0 1135 aa6.66□□□□□ -1.34
CCDC38-206ENST00000548771 CCDC9Q9Y3X0 531 aaKnown RBP6.66□□□□□ -1.34
CCDC38-206ENST00000548771 H7BY64 318 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 TADA3O75528 432 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 CYP2C8P10632 490 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 LTBRP36941 435 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 SARSP49591 514 aaKnown RBP6.65□□□□□ -1.34
CCDC38-206ENST00000548771 CR1LQ2VPA4 569 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 HHIPL2Q6UWX4 724 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 ZNF761Q86XN6 746 aaPredicted RBP6.65□□□□□ -1.34
CCDC38-206ENST00000548771 FAM126BQ8IXS8 530 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 CELF2-AS1Q8N7Q2 184 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 NTMQ9P121 344 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 LRP2BPQ9P2M1 347 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 PALD1Q9ULE6 856 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.34
CCDC38-206ENST00000548771 A0A1W2PQU0 124 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 THBS2P35442 1172 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 PPP2R2AP63151 447 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 LSAMPQ13449 338 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 EMC4Q5J8M3 183 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 EEPD1Q7L9B9 569 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 MILR1Q7Z6M3 343 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 PPIL6Q8IXY8 311 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 KYQ8NBH2 561 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 TRMT2BQ96GJ1 504 aaKnown RBP6.64□□□□□ -1.35
CCDC38-206ENST00000548771 LNPKQ9C0E8 428 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 BTG4Q9NY30 223 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 ZNF652Q9Y2D9 606 aa6.64□□□□□ -1.35
CCDC38-206ENST00000548771 RPL13P26373 211 aaKnown RBP6.63□□□□□ -1.35
CCDC38-206ENST00000548771 MAP4K2Q12851 820 aa6.63□□□□□ -1.35
CCDC38-206ENST00000548771 SMAD4Q13485 552 aaKnown RBP6.63□□□□□ -1.35
CCDC38-206ENST00000548771 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
CCDC38-206ENST00000548771 TMEM169Q96HH4 297 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms